2di3: Difference between revisions

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[[Image:2di3.png|left|200px]]


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==Crystal structure of the transcriptional factor CGL2915 from Corynebacterium glutamicum==
The line below this paragraph, containing "STRUCTURE_2di3", creates the "Structure Box" on the page.
<StructureSection load='2di3' size='340' side='right'caption='[[2di3]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2di3]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Corynebacterium_glutamicum Corynebacterium glutamicum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DI3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DI3 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.05&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
{{STRUCTURE_2di3|  PDB=2di3 |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2di3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2di3 OCA], [https://pdbe.org/2di3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2di3 RCSB], [https://www.ebi.ac.uk/pdbsum/2di3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2di3 ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q8NLM6_CORGL Q8NLM6_CORGL]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/di/2di3_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2di3 ConSurf].
<div style="clear:both"></div>


===Crystal structure of the transcriptional factor CGL2915 from Corynebacterium glutamicum===
==See Also==
 
*[[Transcriptional activator 3D structures|Transcriptional activator 3D structures]]
 
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</StructureSection>
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{{ABSTRACT_PUBMED_18988622}}
 
==About this Structure==
2DI3 is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Corynebacterium_glutamicum Corynebacterium glutamicum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DI3 OCA].
 
==Reference==
Structural and functional characterization of the LldR from Corynebacterium glutamicum: a transcriptional repressor involved in L-lactate and sugar utilization., Gao YG, Suzuki H, Itou H, Zhou Y, Tanaka Y, Wachi M, Watanabe N, Tanaka I, Yao M, Nucleic Acids Res. 2008 Dec;36(22):7110-23. Epub 2008 Nov 6. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/18988622 18988622]
[[Category: Corynebacterium glutamicum]]
[[Category: Corynebacterium glutamicum]]
[[Category: Gao, Y G.]]
[[Category: Large Structures]]
[[Category: Tanaka, I.]]
[[Category: Gao YG]]
[[Category: Yao, M.]]
[[Category: Tanaka I]]
[[Category: Helix-turn-helix]]
[[Category: Yao M]]
[[Category: Transcription]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Dec 24 11:15:43 2008''

Latest revision as of 16:47, 13 March 2024

Crystal structure of the transcriptional factor CGL2915 from Corynebacterium glutamicumCrystal structure of the transcriptional factor CGL2915 from Corynebacterium glutamicum

Structural highlights

2di3 is a 2 chain structure with sequence from Corynebacterium glutamicum. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.05Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

Q8NLM6_CORGL

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

2di3, resolution 2.05Å

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OCA
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