3hm9: Difference between revisions

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[[Image:3hm9.png|left|200px]]


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==Crystal structure of T. thermophilus Argonaute complexed with DNA guide strand and 19-nt RNA target strand==
The line below this paragraph, containing "STRUCTURE_3hm9", creates the "Structure Box" on the page.
<StructureSection load='3hm9' size='340' side='right'caption='[[3hm9]], [[Resolution|resolution]] 3.30&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3hm9]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB27 Thermus thermophilus HB27]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HM9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3HM9 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.3&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
{{STRUCTURE_3hm9|  PDB=3hm9 |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3hm9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3hm9 OCA], [https://pdbe.org/3hm9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3hm9 RCSB], [https://www.ebi.ac.uk/pdbsum/3hm9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3hm9 ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q746M7_THET2 Q746M7_THET2]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hm/3hm9_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3hm9 ConSurf].
<div style="clear:both"></div>


===Crystal structure of T. thermophilus Argonaute complexed with DNA guide strand and 19-nt RNA target strand===
==See Also==
 
*[[Argonaute 3D structures|Argonaute 3D structures]]
 
__TOC__
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</StructureSection>
The line below this paragraph, {{ABSTRACT_PUBMED_19812667}}, adds the Publication Abstract to the page
[[Category: Large Structures]]
(as it appears on PubMed at http://www.pubmed.gov), where 19812667 is the PubMed ID number.
[[Category: Thermus thermophilus HB27]]
-->
[[Category: Li H]]
{{ABSTRACT_PUBMED_19812667}}
[[Category: Patel DJ]]
 
[[Category: Sheng G]]
==About this Structure==
[[Category: Wang Y]]
3HM9 is a 3 chains structure of sequences from [http://en.wikipedia.org/wiki/Thermus_thermophilus_hb27 Thermus thermophilus hb27]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HM9 OCA].
 
==Reference==
<ref group="xtra">PMID:19812667</ref><references group="xtra"/>
[[Category: Thermus thermophilus hb27]]
[[Category: Li, H.]]
[[Category: Patel, D J.]]
[[Category: Sheng, G.]]
[[Category: Wang, Y.]]
[[Category: Argonaute]]
[[Category: Nucleic acid binding protein/dna/rna complex]]
[[Category: Plasmid]]
[[Category: Protein-dna-rna complex]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Oct 21 09:39:37 2009''

Latest revision as of 13:00, 21 February 2024

Crystal structure of T. thermophilus Argonaute complexed with DNA guide strand and 19-nt RNA target strandCrystal structure of T. thermophilus Argonaute complexed with DNA guide strand and 19-nt RNA target strand

Structural highlights

3hm9 is a 3 chain structure with sequence from Thermus thermophilus HB27. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 3.3Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

Q746M7_THET2

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

3hm9, resolution 3.30Å

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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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