3edv: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:3edv.png|left|200px]]


{{STRUCTURE_3edv|  PDB=3edv  |  SCENE=  }}
==Crystal Structure of Repeats 14-16 of Beta2-Spectrin==
 
<StructureSection load='3edv' size='340' side='right'caption='[[3edv]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
===Crystal Structure of Repeats 14-16 of Beta2-Spectrin===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[3edv]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EDV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3EDV FirstGlance]. <br>
{{ABSTRACT_PUBMED_19098307}}
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.951&#8491;</td></tr>
 
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
==About this Structure==
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3edv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3edv OCA], [https://pdbe.org/3edv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3edv RCSB], [https://www.ebi.ac.uk/pdbsum/3edv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3edv ProSAT]</span></td></tr>
[[3edv]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EDV OCA].  
</table>
== Function ==
[https://www.uniprot.org/uniprot/SPTB2_HUMAN SPTB2_HUMAN] Fodrin, which seems to be involved in secretion, interacts with calmodulin in a calcium-dependent manner and is thus candidate for the calcium-dependent movement of the cytoskeleton at the membrane.
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ed/3edv_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3edv ConSurf].
<div style="clear:both"></div>


==See Also==
==See Also==
*[[Spectrin|Spectrin]]
*[[Spectrin 3D structures|Spectrin 3D structures]]
 
__TOC__
==Reference==
</StructureSection>
<ref group="xtra">PMID:019098307</ref><references group="xtra"/>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
[[Category: Michaely, P.]]
[[Category: Large Structures]]
[[Category: Tomchick, D R.]]
[[Category: Michaely P]]
[[Category: Actin capping]]
[[Category: Tomchick DR]]
[[Category: Actin-binding]]
[[Category: Calmodulin-binding]]
[[Category: Cytoskeleton]]
[[Category: Glycoprotein]]
[[Category: Membrane]]
[[Category: Phosphoprotein]]
[[Category: Spectrin repeat]]
[[Category: Structural protein]]

Latest revision as of 12:46, 21 February 2024

Crystal Structure of Repeats 14-16 of Beta2-SpectrinCrystal Structure of Repeats 14-16 of Beta2-Spectrin

Structural highlights

3edv is a 2 chain structure with sequence from Homo sapiens. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.951Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

SPTB2_HUMAN Fodrin, which seems to be involved in secretion, interacts with calmodulin in a calcium-dependent manner and is thus candidate for the calcium-dependent movement of the cytoskeleton at the membrane.

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

3edv, resolution 1.95Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA