1dd3: Difference between revisions

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[[Image:1dd3.png|left|200px]]


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==CRYSTAL STRUCTURE OF RIBOSOMAL PROTEIN L12 FROM THERMOTOGA MARITIMA==
The line below this paragraph, containing "STRUCTURE_1dd3", creates the "Structure Box" on the page.
<StructureSection load='1dd3' size='340' side='right'caption='[[1dd3]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1dd3]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DD3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1DD3 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1dd3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1dd3 OCA], [https://pdbe.org/1dd3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1dd3 RCSB], [https://www.ebi.ac.uk/pdbsum/1dd3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1dd3 ProSAT]</span></td></tr>
{{STRUCTURE_1dd3|  PDB=1dd3  |  SCENE=  }}
</table>
 
== Function ==
===CRYSTAL STRUCTURE OF RIBOSOMAL PROTEIN L12 FROM THERMOTOGA MARITIMA===
[https://www.uniprot.org/uniprot/RL7_THEMA RL7_THEMA] Seems to be the binding site for several of the factors involved in protein synthesis and appears to be essential for accurate translation.
 
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
The line below this paragraph, {{ABSTRACT_PUBMED_10637222}}, adds the Publication Abstract to the page
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    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dd/1dd3_consurf.spt"</scriptWhenChecked>
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{{ABSTRACT_PUBMED_10637222}}
    <text>to colour the structure by Evolutionary Conservation</text>
 
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==About this Structure==
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1dd3 ConSurf].
[[1dd3]] is a 4 chain structure of [[Ribosomal protein L7]] with sequence from [http://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DD3 OCA].  
<div style="clear:both"></div>


==See Also==
==See Also==
*[[Ribosomal protein L7]]
*[[Ribosomal protein L7/L12|Ribosomal protein L7/L12]]
 
__TOC__
==Reference==
</StructureSection>
<ref group="xtra">PMID:10637222</ref><references group="xtra"/>
[[Category: Large Structures]]
[[Category: Thermotoga maritima]]
[[Category: Thermotoga maritima]]
[[Category: Bartunik, H D.]]
[[Category: Bartunik HD]]
[[Category: Bourenkov, G P.]]
[[Category: Bourenkov GP]]
[[Category: Huber, R.]]
[[Category: Huber R]]
[[Category: Wahl, M C.]]
[[Category: Wahl MC]]
[[Category: Alpha-beta structure]]
[[Category: Dimer formation]]
[[Category: Domain]]
[[Category: Five-helix- bundle]]
[[Category: Flexibility]]
[[Category: Four-helix-bundle]]
[[Category: Helical hairpin]]
[[Category: Hinge region]]
[[Category: Ribosome]]

Latest revision as of 09:52, 7 February 2024

CRYSTAL STRUCTURE OF RIBOSOMAL PROTEIN L12 FROM THERMOTOGA MARITIMACRYSTAL STRUCTURE OF RIBOSOMAL PROTEIN L12 FROM THERMOTOGA MARITIMA

Structural highlights

1dd3 is a 4 chain structure with sequence from Thermotoga maritima. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2Å
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

RL7_THEMA Seems to be the binding site for several of the factors involved in protein synthesis and appears to be essential for accurate translation.

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

1dd3, resolution 2.00Å

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OCA
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