7b68: Difference between revisions

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New page: '''Unreleased structure''' The entry 7b68 is ON HOLD Authors: Koekemoer, L., Steindel, M., Fairhead, M., Arrowsmith, C.H., Edwards, A.M., Bountra, C., von Delft, F., Krojer, T., Structu...
 
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'''Unreleased structure'''


The entry 7b68 is ON HOLD
==Crystal structure of MurE from E.coli in complex with Z57299526==
<StructureSection load='7b68' size='340' side='right'caption='[[7b68]], [[Resolution|resolution]] 1.89&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[7b68]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7B68 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7B68 FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.89&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DMS:DIMETHYL+SULFOXIDE'>DMS</scene>, <scene name='pdbligand=LVV:4-[(4-methylphenyl)methyl]-1,4-thiazinane+1,1-dioxide'>LVV</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7b68 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7b68 OCA], [https://pdbe.org/7b68 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7b68 RCSB], [https://www.ebi.ac.uk/pdbsum/7b68 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7b68 ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/MURE_ECOLI MURE_ECOLI] Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Is also able to use many meso-diaminopimelate analogs as substrates, although much less efficiently, but not L-lysine.<ref>PMID:2269304</ref> <ref>PMID:3905407</ref> <ref>PMID:11124264</ref>


Authors: Koekemoer, L., Steindel, M., Fairhead, M., Arrowsmith, C.H., Edwards, A.M., Bountra, C., von Delft, F., Krojer, T., Structural Genomics Consortium (SGC)
==See Also==
 
*[[Mur ligase|Mur ligase]]
Description: Crystal structure of MurE from E.coli in complex with Z57299526
== References ==
[[Category: Unreleased Structures]]
<references/>
[[Category: Edwards, A.M]]
__TOC__
[[Category: Steindel, M]]
</StructureSection>
[[Category: Arrowsmith, C.H]]
[[Category: Escherichia coli K-12]]
[[Category: Structural Genomics Consortium (Sgc)]]
[[Category: Large Structures]]
[[Category: Krojer, T]]
[[Category: Arrowsmith CH]]
[[Category: Fairhead, M]]
[[Category: Bountra C]]
[[Category: Von Delft, F]]
[[Category: Douangamath A]]
[[Category: Bountra, C]]
[[Category: Edwards AM]]
[[Category: Koekemoer, L]]
[[Category: Fairhead M]]
[[Category: Koekemoer L]]
[[Category: Krojer T]]
[[Category: Steindel M]]
[[Category: Talon R]]
[[Category: Von Delft F]]

Latest revision as of 15:22, 1 February 2024

Crystal structure of MurE from E.coli in complex with Z57299526Crystal structure of MurE from E.coli in complex with Z57299526

Structural highlights

7b68 is a 2 chain structure with sequence from Escherichia coli K-12. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.89Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

MURE_ECOLI Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Is also able to use many meso-diaminopimelate analogs as substrates, although much less efficiently, but not L-lysine.[1] [2] [3]

See Also

References

  1. Michaud C, Mengin-Lecreulx D, van Heijenoort J, Blanot D. Over-production, purification and properties of the uridine-diphosphate-N-acetylmuramoyl-L-alanyl-D-glutamate: meso-2,6-diaminopimelate ligase from Escherichia coli. Eur J Biochem. 1990 Dec 27;194(3):853-61. PMID:2269304
  2. Abo-Ghalia M, Michaud C, Blanot D, van Heijenoort J. Specificity of the uridine-diphosphate-N-acetylmuramyl-L-alanyl-D-glutamate: meso-2,6-diaminopimelate synthetase from Escherichia coli. Eur J Biochem. 1985 Nov 15;153(1):81-7. PMID:3905407
  3. Gordon E, Flouret B, Chantalat L, van Heijenoort J, Mengin-Lecreulx D, Dideberg O. Crystal structure of UDP-N-acetylmuramoyl-L-alanyl-D-glutamate: meso-diaminopimelate ligase from Escherichia coli. J Biol Chem. 2001 Apr 6;276(14):10999-1006. Epub 2000 Dec 20. PMID:11124264 doi:http://dx.doi.org/10.1074/jbc.M009835200

7b68, resolution 1.89Å

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