2wb6: Difference between revisions
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< | ==Crystal structure of AFV1-102, a protein from the Acidianus Filamentous Virus 1== | ||
<StructureSection load='2wb6' size='340' side='right'caption='[[2wb6]], [[Resolution|resolution]] 1.95Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[2wb6]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Acidianus_filamentous_virus_1 Acidianus filamentous virus 1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WB6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2WB6 FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.95Å</td></tr> | |||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2wb6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wb6 OCA], [https://pdbe.org/2wb6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2wb6 RCSB], [https://www.ebi.ac.uk/pdbsum/2wb6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2wb6 ProSAT]</span></td></tr> | |||
</table> | |||
== Function == | |||
[https://www.uniprot.org/uniprot/Y102_AFV1Y Y102_AFV1Y] | |||
<div style="background-color:#fffaf0;"> | |||
== Publication Abstract from PubMed == | |||
Viruses infecting hyperthermophilic archaea have intriguing morphologies and genomic properties. The vast majority of their genes do not have homologs other than in other hyperthermophilic viruses, and the biology of these viruses is poorly understood. As part of a structural genomics project on the proteins of these viruses, we present here the structure of a 102 amino acid protein from acidianus filamentous virus 1 (AFV1-102). The structure shows that it is made of two identical motifs that have poor sequence similarity. Although no function can be proposed from structural analysis, tight binding of the gateway tag peptide in a groove between the two motifs suggests AFV1-102 is involved in protein protein interactions. | |||
Crystal structure of AFV1-102, a protein from the acidianus filamentous virus 1.,Keller J, Leulliot N, Collinet B, Campanacci V, Cambillau C, Pranghisvilli D, van Tilbeurgh H Protein Sci. 2009 Apr;18(4):845-9. PMID:19319936<ref>PMID:19319936</ref> | |||
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |||
</div> | |||
<div class="pdbe-citations 2wb6" style="background-color:#fffaf0;"></div> | |||
== References == | |||
<references/> | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Acidianus filamentous virus 1]] | [[Category: Acidianus filamentous virus 1]] | ||
[[Category: Cambillau | [[Category: Large Structures]] | ||
[[Category: Campanacci | [[Category: Cambillau C]] | ||
[[Category: Collinet | [[Category: Campanacci V]] | ||
[[Category: Keller | [[Category: Collinet B]] | ||
[[Category: Leulliot | [[Category: Keller J]] | ||
[[Category: Pranghisvilli | [[Category: Leulliot N]] | ||
[[Category: Tilbeurgh | [[Category: Pranghisvilli D]] | ||
[[Category: Van Tilbeurgh H]] | |||
Latest revision as of 15:38, 10 January 2024
Crystal structure of AFV1-102, a protein from the Acidianus Filamentous Virus 1Crystal structure of AFV1-102, a protein from the Acidianus Filamentous Virus 1
Structural highlights
FunctionPublication Abstract from PubMedViruses infecting hyperthermophilic archaea have intriguing morphologies and genomic properties. The vast majority of their genes do not have homologs other than in other hyperthermophilic viruses, and the biology of these viruses is poorly understood. As part of a structural genomics project on the proteins of these viruses, we present here the structure of a 102 amino acid protein from acidianus filamentous virus 1 (AFV1-102). The structure shows that it is made of two identical motifs that have poor sequence similarity. Although no function can be proposed from structural analysis, tight binding of the gateway tag peptide in a groove between the two motifs suggests AFV1-102 is involved in protein protein interactions. Crystal structure of AFV1-102, a protein from the acidianus filamentous virus 1.,Keller J, Leulliot N, Collinet B, Campanacci V, Cambillau C, Pranghisvilli D, van Tilbeurgh H Protein Sci. 2009 Apr;18(4):845-9. PMID:19319936[1] From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine. References
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