1iue: Difference between revisions

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[[Image:1iue.png|left|200px]]


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==Crystal Structure Analysis of ferredoxin from Plasmodium falciparum==
The line below this paragraph, containing "STRUCTURE_1iue", creates the "Structure Box" on the page.
<StructureSection load='1iue' size='340' side='right'caption='[[1iue]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1iue]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Plasmodium_falciparum_3D7 Plasmodium falciparum 3D7]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IUE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1IUE FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FES:FE2/S2+(INORGANIC)+CLUSTER'>FES</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
{{STRUCTURE_1iue|  PDB=1iue  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1iue FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1iue OCA], [https://pdbe.org/1iue PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1iue RCSB], [https://www.ebi.ac.uk/pdbsum/1iue PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1iue ProSAT]</span></td></tr>
 
</table>
===Crystal Structure Analysis of ferredoxin from Plasmodium falciparum===
== Function ==
 
[https://www.uniprot.org/uniprot/FER_PLAF7 FER_PLAF7] Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions (PubMed:16289098). By transferring electrons to 4-hydroxy-3-methylbut-2-enyl diphosphate reductase LytB/IspH, plays a role in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis (PubMed:16289098).<ref>PMID:16289098</ref>
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
[[1iue]] is a 2 chain structure of [[Ferredoxin]] with sequence from [http://en.wikipedia.org/wiki/Plasmodium_falciparum_3d7 Plasmodium falciparum 3d7]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IUE OCA].  
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/iu/1iue_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1iue ConSurf].
<div style="clear:both"></div>


==See Also==
==See Also==
*[[Ferredoxin]]
*[[Ferredoxin 3D structures|Ferredoxin 3D structures]]
[[Category: Plasmodium falciparum 3d7]]
== References ==
[[Category: Hase, T.]]
<references/>
[[Category: Kimata-Ariga, Y.]]
__TOC__
[[Category: Kurisu, G.]]
</StructureSection>
[[Category: Electron transport]]
[[Category: Large Structures]]
[[Category: Iron-sulfur]]
[[Category: Plasmodium falciparum 3D7]]
[[Category: Hase T]]
[[Category: Kimata-Ariga Y]]
[[Category: Kurisu G]]

Latest revision as of 02:37, 28 December 2023

Crystal Structure Analysis of ferredoxin from Plasmodium falciparumCrystal Structure Analysis of ferredoxin from Plasmodium falciparum

Structural highlights

1iue is a 2 chain structure with sequence from Plasmodium falciparum 3D7. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.7Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

FER_PLAF7 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions (PubMed:16289098). By transferring electrons to 4-hydroxy-3-methylbut-2-enyl diphosphate reductase LytB/IspH, plays a role in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis (PubMed:16289098).[1]

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

References

  1. ↑ Rohrich RC, Englert N, Troschke K, Reichenberg A, Hintz M, Seeber F, Balconi E, Aliverti A, Zanetti G, Kohler U, Pfeiffer M, Beck E, Jomaa H, Wiesner J. Reconstitution of an apicoplast-localised electron transfer pathway involved in the isoprenoid biosynthesis of Plasmodium falciparum. FEBS Lett. 2005 Nov 21;579(28):6433-8. doi: 10.1016/j.febslet.2005.10.037. Epub , 2005 Nov 2. PMID:16289098 doi:http://dx.doi.org/10.1016/j.febslet.2005.10.037

1iue, resolution 1.70Å

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