3vw5: Difference between revisions

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OCA

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 ==Crystal structure of sugar epimerase from ruminal bacterium==
-<StructureSection load='3vw5' size='340' side='right' caption='[[3vw5]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
+<StructureSection load='3vw5' size='340' side='right'caption='[[3vw5]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[3vw5]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Ruminococcus_albus Ruminococcus albus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VW5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3VW5 FirstGlance]. <br>
+<table><tr><td colspan='2'>[[3vw5]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Ruminococcus_albus Ruminococcus albus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VW5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3VW5 FirstGlance]. <br>
-</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CE ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1264 Ruminococcus albus])</td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
-<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Cellobiose_epimerase Cellobiose epimerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.1.3.11 5.1.3.11] </span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3vw5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vw5 OCA], [https://pdbe.org/3vw5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3vw5 RCSB], [https://www.ebi.ac.uk/pdbsum/3vw5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3vw5 ProSAT]</span></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3vw5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vw5 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3vw5 RCSB], [http://www.ebi.ac.uk/pdbsum/3vw5 PDBsum]</span></td></tr>
 </table>
+== Function ==
+[https://www.uniprot.org/uniprot/CEEP_RUMAL CEEP_RUMAL] Catalyzes the reversible epimerization of cellobiose to 4-O-beta-D-glucopyranosyl-D-mannose (Glc-Man). Can also epimerize cellotriose to Glc-Glc-Man, cellotetraose to Glc-Glc-Glc-Man, and lactose to epilactose.[HAMAP-Rule:MF_00929]<ref>PMID:17612504</ref> <ref>PMID:18392616</ref>
 <div style="background-color:#fffaf0;">
 == Publication Abstract from PubMed ==
@@ Line 15: / Line 17: @@
 From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 </div>
+<div class="pdbe-citations 3vw5" style="background-color:#fffaf0;"></div>
 == References ==
 <references/>
 __TOC__
 </StructureSection>
-[[Category: Cellobiose epimerase]]
+[[Category: Large Structures]]
 [[Category: Ruminococcus albus]]
-[[Category: Fujiwara, T]]
+[[Category: Fujiwara T]]
-[[Category: Saburi, W]]
+[[Category: Saburi W]]
-[[Category: Tanaka, I]]
+[[Category: Tanaka I]]
-[[Category: Yao, M]]
+[[Category: Yao M]]
-[[Category: Carbohydrate/sugar binding]]
-[[Category: Epimerase]]
-[[Category: Epimerization]]
-[[Category: Isomerase]]