3ulx: Difference between revisions

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==Crystal structural of the conserved domain of Rice Stress-responsive NAC1==
==Crystal structural of the conserved domain of Rice Stress-responsive NAC1==
<StructureSection load='3ulx' size='340' side='right' caption='[[3ulx]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
<StructureSection load='3ulx' size='340' side='right'caption='[[3ulx]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3ulx]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Japanese_rice Japanese rice]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ULX OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ULX FirstGlance]. <br>
<table><tr><td colspan='2'>[[3ulx]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Oryza_sativa_Japonica_Group Oryza sativa Japonica Group]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ULX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3ULX FirstGlance]. <br>
</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">snac1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=39947 Japanese rice])</td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ulx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ulx OCA], [http://pdbe.org/3ulx PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3ulx RCSB], [http://www.ebi.ac.uk/pdbsum/3ulx PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3ulx ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ulx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ulx OCA], [https://pdbe.org/3ulx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ulx RCSB], [https://www.ebi.ac.uk/pdbsum/3ulx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ulx ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/NAC2_ORYSJ NAC2_ORYSJ] Transcription factor that possesses transactivation activity (PubMed:16924117, PubMed:20632034). Transcription activator involved in response to abiotic stresses. Plays a positive role during dehydration and salt stress. Binds specifically to the 5'-CATGTG-3' motif found in promoters of stress-responsive genes (PubMed:16924117).<ref>PMID:16924117</ref> <ref>PMID:20632034</ref>


==See Also==
==See Also==
*[[NAC transcription factor|NAC transcription factor]]
*[[NAC transcription factor|NAC transcription factor]]
== References ==
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Japanese rice]]
[[Category: Large Structures]]
[[Category: Chen, Q F]]
[[Category: Oryza sativa Japonica Group]]
[[Category: Lou, Z Y]]
[[Category: Chen QF]]
[[Category: Wang, Q]]
[[Category: Lou ZY]]
[[Category: Xiong, L Z]]
[[Category: Wang Q]]
[[Category: Dna binding protein]]
[[Category: Xiong LZ]]
[[Category: Nac family]]
[[Category: Stress-responsive]]

Latest revision as of 20:36, 1 November 2023

Crystal structural of the conserved domain of Rice Stress-responsive NAC1Crystal structural of the conserved domain of Rice Stress-responsive NAC1

Structural highlights

3ulx is a 1 chain structure with sequence from Oryza sativa Japonica Group. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.6Å
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

NAC2_ORYSJ Transcription factor that possesses transactivation activity (PubMed:16924117, PubMed:20632034). Transcription activator involved in response to abiotic stresses. Plays a positive role during dehydration and salt stress. Binds specifically to the 5'-CATGTG-3' motif found in promoters of stress-responsive genes (PubMed:16924117).[1] [2]

See Also

References

  1. ↑ Hu H, Dai M, Yao J, Xiao B, Li X, Zhang Q, Xiong L. Overexpressing a NAM, ATAF, and CUC (NAC) transcription factor enhances drought resistance and salt tolerance in rice. Proc Natl Acad Sci U S A. 2006 Aug 29;103(35):12987-92. PMID:16924117 doi:10.1073/pnas.0604882103
  2. ↑ Takasaki H, Maruyama K, Kidokoro S, Ito Y, Fujita Y, Shinozaki K, Yamaguchi-Shinozaki K, Nakashima K. The abiotic stress-responsive NAC-type transcription factor OsNAC5 regulates stress-inducible genes and stress tolerance in rice. Mol Genet Genomics. 2010 Sep;284(3):173-83. PMID:20632034 doi:10.1007/s00438-010-0557-0

3ulx, resolution 2.60Å

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OCA
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