3a1p: Difference between revisions
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New page: '''Unreleased structure''' The entry 3a1p is ON HOLD Authors: Kaminishi, T., Takemoto, C., Tatsuguchi, A., Kawazoe, M., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics ... |
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==Structure of Ribosome maturation protein RimM and Ribosomal protein S19== | |||
<StructureSection load='3a1p' size='340' side='right'caption='[[3a1p]], [[Resolution|resolution]] 2.30Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[3a1p]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3A1P OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3A1P FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3Å</td></tr> | |||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=UNX:UNKNOWN+ATOM+OR+ION'>UNX</scene></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3a1p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3a1p OCA], [https://pdbe.org/3a1p PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3a1p RCSB], [https://www.ebi.ac.uk/pdbsum/3a1p PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3a1p ProSAT], [https://www.topsan.org/Proteins/RSGI/3a1p TOPSAN]</span></td></tr> | |||
</table> | |||
== Function == | |||
[https://www.uniprot.org/uniprot/RIMM_THET8 RIMM_THET8] An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes (By similarity). | |||
== Evolutionary Conservation == | |||
[[Image:Consurf_key_small.gif|200px|right]] | |||
Check<jmol> | |||
<jmolCheckbox> | |||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/a1/3a1p_consurf.spt"</scriptWhenChecked> | |||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |||
<text>to colour the structure by Evolutionary Conservation</text> | |||
</jmolCheckbox> | |||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3a1p ConSurf]. | |||
<div style="clear:both"></div> | |||
==See Also== | |||
*[[Ribosomal protein S19|Ribosomal protein S19]] | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Large Structures]] | |||
[[Category: Thermus thermophilus HB8]] | |||
[[Category: Kaminishi T]] | |||
[[Category: Kawazoe M]] | |||
[[Category: Shirouzu M]] | |||
[[Category: Takemoto C]] | |||
[[Category: Tatsuguchi A]] | |||
[[Category: Yokoyama S]] | |||
Latest revision as of 17:07, 1 November 2023
Structure of Ribosome maturation protein RimM and Ribosomal protein S19Structure of Ribosome maturation protein RimM and Ribosomal protein S19
Structural highlights
FunctionRIMM_THET8 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes (By similarity). Evolutionary Conservation Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf. See Also |
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