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[[Image:3a1p.png|left|200px]]


{{STRUCTURE_3a1p|  PDB=3a1p  |  SCENE=  }}
==Structure of Ribosome maturation protein RimM and Ribosomal protein S19==
 
<StructureSection load='3a1p' size='340' side='right'caption='[[3a1p]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
===Structure of Ribosome maturation protein RimM and Ribosomal protein S19===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[3a1p]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3A1P OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3A1P FirstGlance]. <br>
 
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
==About this Structure==
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=UNX:UNKNOWN+ATOM+OR+ION'>UNX</scene></td></tr>
[[3a1p]] is a 4 chain structure of [[Ribosomal protein S19]] with sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3A1P OCA].  
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3a1p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3a1p OCA], [https://pdbe.org/3a1p PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3a1p RCSB], [https://www.ebi.ac.uk/pdbsum/3a1p PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3a1p ProSAT], [https://www.topsan.org/Proteins/RSGI/3a1p TOPSAN]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/RIMM_THET8 RIMM_THET8] An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes (By similarity).
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/a1/3a1p_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3a1p ConSurf].
<div style="clear:both"></div>


==See Also==
==See Also==
*[[Ribosomal protein S19|Ribosomal protein S19]]
*[[Ribosomal protein S19|Ribosomal protein S19]]
[[Category: Thermus thermophilus]]
__TOC__
[[Category: Kaminishi, T.]]
</StructureSection>
[[Category: Kawazoe, M.]]
[[Category: Large Structures]]
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
[[Category: Thermus thermophilus HB8]]
[[Category: Shirouzu, M.]]
[[Category: Kaminishi T]]
[[Category: Takemoto, C.]]
[[Category: Kawazoe M]]
[[Category: Tatsuguchi, A.]]
[[Category: Shirouzu M]]
[[Category: Yokoyama, S.]]
[[Category: Takemoto C]]
[[Category: 16s rrna processing]]
[[Category: Tatsuguchi A]]
[[Category: 30s ribosomal subunit]]
[[Category: Yokoyama S]]
[[Category: Beta barrel]]
[[Category: Chaperone]]
[[Category: National project on protein structural and functional analyse]]
[[Category: Nppsfa]]
[[Category: Prc-barrel domain]]
[[Category: Protein-protein complex]]
[[Category: Ribonucleoprotein]]
[[Category: Ribosomal protein]]
[[Category: Ribosome]]
[[Category: Ribosome biogenesis]]
[[Category: Riken structural genomics/proteomics initiative]]
[[Category: Rimm n-terminal domain]]
[[Category: Rna-binding]]
[[Category: Rrna binding]]
[[Category: Rsgi]]
[[Category: Structural genomic]]

Latest revision as of 17:07, 1 November 2023

Structure of Ribosome maturation protein RimM and Ribosomal protein S19Structure of Ribosome maturation protein RimM and Ribosomal protein S19

Structural highlights

3a1p is a 4 chain structure with sequence from Thermus thermophilus HB8. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.3Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

RIMM_THET8 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes (By similarity).

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

3a1p, resolution 2.30Å

Drag the structure with the mouse to rotate

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