5ie3: Difference between revisions

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'''Unreleased structure'''


The entry 5ie3 is ON HOLD
==Crystal structure of a plant enzyme==
 
<StructureSection load='5ie3' size='340' side='right'caption='[[5ie3]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
Authors: MR Fan, M Li, WR Chang
== Structural highlights ==
 
<table><tr><td colspan='2'>[[5ie3]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5IE3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5IE3 FirstGlance]. <br>
Description: Crystal structure of a plant enzyme
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
[[Category: Unreleased Structures]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AMP:ADENOSINE+MONOPHOSPHATE'>AMP</scene>, <scene name='pdbligand=OXD:OXALIC+ACID'>OXD</scene></td></tr>
[[Category: Mr Fan, M Li, Wr Chang]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5ie3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ie3 OCA], [https://pdbe.org/5ie3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5ie3 RCSB], [https://www.ebi.ac.uk/pdbsum/5ie3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5ie3 ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/4CLLA_ARATH 4CLLA_ARATH] Oxalyl-CoA synthetase acting exclusively against oxalate. No activity with malonate, succinate, malate, acetate, formate, lactate, glycolate, glyoxylate or glutarate. Required for oxalate degradation, normal seed development and defense against oxalate-producing fungal pathogens.<ref>PMID:22447686</ref>
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Arabidopsis thaliana]]
[[Category: Large Structures]]
[[Category: Chang WR]]
[[Category: Fan MR]]
[[Category: Li M]]

Latest revision as of 16:47, 30 August 2023

Crystal structure of a plant enzymeCrystal structure of a plant enzyme

Structural highlights

5ie3 is a 2 chain structure with sequence from Arabidopsis thaliana. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.9Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

4CLLA_ARATH Oxalyl-CoA synthetase acting exclusively against oxalate. No activity with malonate, succinate, malate, acetate, formate, lactate, glycolate, glyoxylate or glutarate. Required for oxalate degradation, normal seed development and defense against oxalate-producing fungal pathogens.[1]

References

  1. ↑ Foster J, Kim HU, Nakata PA, Browse J. A previously unknown oxalyl-CoA synthetase is important for oxalate catabolism in Arabidopsis. Plant Cell. 2012 Mar;24(3):1217-29. doi: 10.1105/tpc.112.096032. Epub 2012 Mar, 23. PMID:22447686 doi:http://dx.doi.org/10.1105/tpc.112.096032

5ie3, resolution 1.90Å

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OCA
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