1byo: Difference between revisions

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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

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 ==WILD-TYPE PLASTOCYANIN FROM SILENE==
-<StructureSection load='1byo' size='340' side='right' caption='[[1byo]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
+<StructureSection load='1byo' size='340' side='right'caption='[[1byo]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[1byo]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Silene_latifolia_subsp._alba Silene latifolia subsp. alba]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BYO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1BYO FirstGlance]. <br>
+<table><tr><td colspan='2'>[[1byo]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Silene_latifolia_subsp._alba Silene latifolia subsp. alba]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BYO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1BYO FirstGlance]. <br>
-</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene><br>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-<tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1byp|1byp]]</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene></td></tr>
-<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1byo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1byo OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1byo RCSB], [http://www.ebi.ac.uk/pdbsum/1byo PDBsum]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1byo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1byo OCA], [https://pdbe.org/1byo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1byo RCSB], [https://www.ebi.ac.uk/pdbsum/1byo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1byo ProSAT]</span></td></tr>
-<table>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/PLAS_SILLB PLAS_SILLB] Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I.<ref>PMID:10220581</ref>
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
 Check<jmol>
    <jmolCheckbox>
-     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/by/1byo_consurf.spt"</scriptWhenChecked>
+     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/by/1byo_consurf.spt"</scriptWhenChecked>
      <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
      <text>to colour the structure by Evolutionary Conservation</text>
    </jmolCheckbox>
-</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1byo ConSurf].
 <div style="clear:both"></div>
 <div style="background-color:#fffaf0;">
@@ Line 25: / Line 28: @@
 From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 </div>
+<div class="pdbe-citations 1byo" style="background-color:#fffaf0;"></div>
+==See Also==
+*[[Plastocyanin 3D structures|Plastocyanin 3D structures]]
 == References ==
 <references/>
 __TOC__
 </StructureSection>
+[[Category: Large Structures]]
 [[Category: Silene latifolia subsp. alba]]
-[[Category: Gotowda, M.]]
+[[Category: Gotowda M]]
-[[Category: Hibino, T.]]
+[[Category: Hibino T]]
-[[Category: Inoue, T.]]
+[[Category: Inoue T]]
-[[Category: Kai, Y.]]
+[[Category: Kai Y]]
-[[Category: Li, C.]]
+[[Category: Li C]]
-[[Category: Sugawara, H.]]
+[[Category: Sugawara H]]
-[[Category: Takabe, T.]]
+[[Category: Takabe T]]
-[[Category: Electron transfer]]
-[[Category: Electron transport]]
-[[Category: Photosynthesis]]