5f4m: Difference between revisions
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New page: '''Unreleased structure''' The entry 5f4m is ON HOLD Authors: Singh, B.K., Hansman, G.S. Description: Protruding domain of GII.17 norovirus Kawasaki323 [[Category: Unreleased Structure... |
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==Protruding domain of GII.17 norovirus Kawasaki323== | |||
<StructureSection load='5f4m' size='340' side='right'caption='[[5f4m]], [[Resolution|resolution]] 2.27Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[5f4m]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Norovirus_13-BH-1/2013/GII.17 Norovirus 13-BH-1/2013/GII.17]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5F4M OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5F4M FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.27Å</td></tr> | |||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5f4m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5f4m OCA], [https://pdbe.org/5f4m PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5f4m RCSB], [https://www.ebi.ac.uk/pdbsum/5f4m PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5f4m ProSAT]</span></td></tr> | |||
</table> | |||
== Function == | |||
[https://www.uniprot.org/uniprot/A0A0A7CJV4_9CALI A0A0A7CJV4_9CALI] | |||
<div style="background-color:#fffaf0;"> | |||
== Publication Abstract from PubMed == | |||
Recent reports suggest that human GII.17 noroviruses are increasing in prevalence. We analyzed the evolutionary changes of three GII.17 capsid protruding (P) domains. We found that the GII.17 P domains had little cross-reactivity with antisera raised against the dominant GII.4 strains. X-ray structural analysis of GII.17 P domains from 2002 to 2014/15 suggested that surface exposed substitutions on the uppermost part of the P domain might have generated a novel 2014/15 GII.17 variant. | |||
Structural evolution of the emerging 2014/15 GII.17 noroviruses.,Singh BK, Koromyslova A, Hefele L, Gurth C, Hansman GS J Virol. 2015 Dec 23. pii: JVI.03119-15. PMID:26699640<ref>PMID:26699640</ref> | |||
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |||
[[Category: | </div> | ||
[[Category: Hansman | <div class="pdbe-citations 5f4m" style="background-color:#fffaf0;"></div> | ||
[[Category: Singh | |||
==See Also== | |||
*[[Virus coat proteins 3D structures|Virus coat proteins 3D structures]] | |||
== References == | |||
<references/> | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Large Structures]] | |||
[[Category: Norovirus 13-BH-1/2013/GII 17]] | |||
[[Category: Hansman GS]] | |||
[[Category: Singh BK]] | |||
Latest revision as of 11:45, 12 July 2023
Protruding domain of GII.17 norovirus Kawasaki323Protruding domain of GII.17 norovirus Kawasaki323
Structural highlights
FunctionPublication Abstract from PubMedRecent reports suggest that human GII.17 noroviruses are increasing in prevalence. We analyzed the evolutionary changes of three GII.17 capsid protruding (P) domains. We found that the GII.17 P domains had little cross-reactivity with antisera raised against the dominant GII.4 strains. X-ray structural analysis of GII.17 P domains from 2002 to 2014/15 suggested that surface exposed substitutions on the uppermost part of the P domain might have generated a novel 2014/15 GII.17 variant. Structural evolution of the emerging 2014/15 GII.17 noroviruses.,Singh BK, Koromyslova A, Hefele L, Gurth C, Hansman GS J Virol. 2015 Dec 23. pii: JVI.03119-15. PMID:26699640[1] From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine. See AlsoReferences
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