3ghd: Difference between revisions

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{{Seed}}
[[Image:3ghd.jpg|left|200px]]


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==Crystal structure of a cystathionine beta-synthase domain protein fused to a Zn-ribbon-like domain==
The line below this paragraph, containing "STRUCTURE_3ghd", creates the "Structure Box" on the page.
<StructureSection load='3ghd' size='340' side='right'caption='[[3ghd]], [[Resolution|resolution]] 1.81&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3ghd]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_43587 Atcc 43587]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3fio 3fio]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GHD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GHD FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ghd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ghd OCA], [https://pdbe.org/3ghd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ghd RCSB], [https://www.ebi.ac.uk/pdbsum/3ghd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ghd ProSAT], [https://www.topsan.org/Proteins/MCSG/3ghd TOPSAN]</span></td></tr>
{{STRUCTURE_3ghd| PDB=3ghd |  SCENE= }}
</table>
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gh/3ghd_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ghd ConSurf].
<div style="clear:both"></div>


===Crystal structure of a cystathionine beta-synthase domain protein fused to a Zn-ribbon-like domain===
==See Also==
 
*[[Aminoacyl tRNA synthetase 3D structures|Aminoacyl tRNA synthetase 3D structures]]
 
__TOC__
==About this Structure==
</StructureSection>
3GHD is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Pyrococcus_furiosus Pyrococcus furiosus]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3fio 3fio]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GHD OCA].
[[Category: Atcc 43587]]
[[Category: Pyrococcus furiosus]]
[[Category: Large Structures]]
[[Category: Brown,G.]]
[[Category: Brown, G]]
[[Category: Chruszcz,M.]]
[[Category: Chruszcz, M]]
[[Category: Dong,A.]]
[[Category: Dong, A]]
[[Category: Edwards,A M.]]
[[Category: Edwards, A M]]
[[Category: Joachimiak,A.]]
[[Category: Joachimiak, A]]
[[Category: MCSG, Midwest Center for Structural Genomics.]]
[[Category: Structural genomic]]
[[Category: Minor,W.]]
[[Category: Minor, W]]
[[Category: Proudfoot,M.]]
[[Category: Proudfoot, M]]
[[Category: Savchenko,A.]]
[[Category: Savchenko, A]]
[[Category: Xu,X.]]
[[Category: Xu, X]]
[[Category: Yaleunin,A.]]
[[Category: Yaleunin, A]]
[[Category: Apc40009]]
[[Category: Apc40009]]
[[Category: Cystathionine beta-synthase domain protein]]
[[Category: Cystathionine beta-synthase domain protein]]
Line 32: Line 40:
[[Category: Metal bindin]]
[[Category: Metal bindin]]
[[Category: Metal binding protein]]
[[Category: Metal binding protein]]
[[Category: Midwest center for structural genomic]]
[[Category: Nucleotide binding protein]]
[[Category: Nucleotide binding protein]]
[[Category: Pf1953]]
[[Category: Pf1953]]
[[Category: Protein structure initiative]]
[[Category: PSI, Protein structure initiative]]
[[Category: Psi-2]]
[[Category: Structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Apr  2 15:20:38 2009''

Latest revision as of 11:05, 9 March 2022

Crystal structure of a cystathionine beta-synthase domain protein fused to a Zn-ribbon-like domainCrystal structure of a cystathionine beta-synthase domain protein fused to a Zn-ribbon-like domain

Structural highlights

3ghd is a 2 chain structure with sequence from Atcc 43587. This structure supersedes the now removed PDB entry 3fio. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
NonStd Res:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

3ghd, resolution 1.81Å

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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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