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| </StructureSection> | | </StructureSection> |
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| ==3D structures of transcription initiation factors==
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| Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}}
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| {{#tree:id=OrganizedByTopic|openlevels=0|
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| *TFIIA
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| **[[5m4s]] – hTFIIA – human<br />
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| **[[6mzm]] – hTFIIA+TFIID + TBP + DNA – Cryo EM<br />
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| **[[1nvp]] – hTFIIA + TBP + DNA <br />
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| **[[5fur]] – hTFIIA + hTFIIF + TBP + DNA - CryoEM<br />
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| **[[1ytf]], [[1nh2]], [[1rm1]] – yTFIIA + TBP + DNA – yeast<br />
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| *TFIIB
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| **[[1tfb]] – hTFIIB - NMR<BR />
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| **[[1dl6]] - hTFIIB N terminal – NMR<br />
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| **[[5wh1]] - hTFIIB C terminal <br />
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| **[[1rly]] - hTFIIB Zn ribbon domain + Zn – NMR<br />
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| **[[1ro4]] - hTFIIB Zn ribbon domain – NMR<br />
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| **[[1ais]], [[1d3u]] - TFIIB C terminal + TBP + DNA – ''Pyrococcus woesei''<br />
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| **[[1pft]] – TFIIB N terminal – ''Pyrococcus furiosus'' – NMR<BR />
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| **[[5o9j]], [[5o9i]] - TFIIB – ''Methanocaldococcus jannaschii'' <br />
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| *TFIIA+TFIIB
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| **[[6o9l]] – hTFIIA+TFIIB in RNA polymerase II – Cryo EM<br />
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| *TFIIIB
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| **[[5n9g]] – hTFIIIB + TBP + DNA<br />
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| **[[6f44]], [[6f42]], [[6f41]], [[6f40]], [[6eu0]], [[6cnf]], [[6cnd]], [[6cnc]], [[6cnb]] – yTFIIIB + RNA polymerase III – Cryo EM<br />
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| *TFIID
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| **[[1bh8]] – hTFIID<BR />
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| **[[1eqf]] – hTFIID subunit 1<br />
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| **[[6fic]] – hTFIID subunit 1 + inhibitor<br />
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| **[[3uv5]] – hTFIID subunit 1 bromodomain 1-2<br />
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| **[[3uv4]] – hTFIID subunit 1 bromodomain 2<br />
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| **[[6bqd]] – hTFIID subunit 1 bromodomain 2 + inhibitor <br />
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| **[[3aad]] – hTFIID subunit 1 bromodomain 1-2 + histone chaperone ASF1A<br />
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| **[[5mg2]] – hTFIID subunit 1 bromodomain 2 + inhibitor<br />
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| **[[4yym]], [[4yyn]] – hTFIID subunit 1 bromodomain 2 + histone peptide<br />
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| **[[5c13]], [[5wxg]], [[5mxy]] – hTFIID subunit 3 PHD finger + histone peptide<br />
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| **[[5wxh]] – hTFIID subunit 3 PHD finger + histone peptide<br />
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| **[[5i1q]], [[5i29]] – hTFIID subunit 1 bromodomain 2 + pyrrolopyridone<br />
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| **[[5eg2]] - hTFIID subunit 10 + SETD7 + SAH<br />
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| **[[4wv4]] - hTFIID subunits 8+10 <br />
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| **[[4grw]] - hTFIID subunits 1+7 <br />
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| **[[6f39]] - hTFIID subunits 5+6+9 <br />
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| **[[6mzl]] - hTFIID subunits 1-13 + TBP – Cryo EM<br />
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| **[[6mzd]] - hTFIID subunits 1,3-6,9-13 + TBP – Cryo EM<br />
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| **[[6mzc]] - hTFIID subunits 2,4-6,8-12 – Cryo EM<br />
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| **[[1bh9]] – hTFIID + PCMBS<BR />
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| **[[6df7]], [[6df4]] – TFIID subunit 1 bromodomain 2 + inhibitor - rabbit<br />
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| **[[1tba]] – TFIID – ''Drosophila melanogaster'' - NMR<BR />
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| **[[1qn3]], [[1qn4]], [[1qn5]], [[1qn6]], [[1qn7]], [[1qn8]], [[1qn9]], [[1qna]], [[1qnb]], [[1qnc]], [[1qne]] – TFIID + DNA – ''Arabidopsis thaliana''<br />
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| **[[4oy2]] - yTFIID subunits 1+7 <br />
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| **[[6mip]] - yTFIID subunits 14 <br />
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| **[[5iok]], [[5o7e]], [[6miq]], [[6mio]], [[6min]] – yTFIID subunit 14 + histone peptide<br />
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| **[[6t9j]] - yTFIID subunit 12 + Spt20 + transcription-associated protein – Cryo EM <br />
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| **[[6t9k]], [[6t9i]] - yTFIID in SAGA complex – Cryo EM <br />
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| **[[6tbm]], [[6tb4]] - TFIID in SAGA complex – ''Komagataella phaffii'' – Cryo EM <br />
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| *TFIIE
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| **[[5gpy]] - hTFIIE subunits α+β<br />
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| **[[1vd4]] - hTFIIE Zn finger domain – NMR<br />
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| **[[2rnq]] – hTFIIE C terminal - NMR<br />
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| **[[2rnr]] – hTFIIE C terminal + TFIIH PH domain- NMR<br />
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| *TFIIF
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| **[[1f3u]] – hTFIIF<br />
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| **[[1nha]] – hTFIIF C terminal - NMR<br />
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| **[[1i27]] – hTFIIF C terminal (mutant)<br />
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| **[[1j2x]] – hTFIIF C terminal + RNA polymerase CTD phosphatase peptide<br />
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| **[[1onv]] – hTFIIF C terminal + serine phosphatase peptide - NMR<br />
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| **[[2k7l]] – hTFIIF C terminal + FCP1 peptide - NMR<br />
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| *TF in RNA polymerase II
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| **[[5iy6]], [[5iy7]], [[5iy8]], [[5iy9]], [[5iya]], [[5iyb]], [[5iyc]], [[5iyd]] – hTFIIA + hTFIIB + hTFIIE + hTFIIF + hTFIIH + DNA – Cryo EM<br />
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| **[[5fyw]] – yTFIIA + yTFIIE + yTFIIF + DNA <br />
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| **[[5fz5]], [[6gym]], [[6gyl]] – yTFIIA + yTFIIE + yTFIIF + DNA – Cryo EM<br />
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| **[[6gyk]] – yTFIIA + yTFIIB + yTFIIF + DNA – Cryo EM<br />
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| **[[4v1o]], [[4v1n]] – yTFIIB + yTFIIF – Cryo EM<br />
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| **[[3k1f]], [[3k7a]], [[4bbr]], [[4bbs]] – yTFIIB <br />
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| **[[5fmf]], [[5sva]], [[5oqj]], [[5oqm]] – yTFIIA + yTFIIB + yTFIIE + yTFIIF + yTFIIH + DNA – Cryo EM<br />
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| *TF RRN in RNA polymerase I
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| **[[5o7x]] – yTF RRN6+RRN7+RRN11 <br />
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| **[[5g5l]] – yTF RRN3 in RNA polymerase I<br />
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| **[[6rrd]], [[6rqt]] – yTF RRN3 in RNA polymerase I – Cryo EM<br />
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| **[[6ruo]] – yTF RRN3+RRN6+RRN11 in RNA polymerase I – Cryo EM<br />
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| **[[5w66]], [[5w65]], [[5w64]], [[5w5y]], [[5oa1]] – yTF RRN6+RRN7+RRN11 in RNA polymerase I – Cryo EM<br />
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| **[[6rwe]], [[6rui]], [[6rql]], [[6rqh]], [[5n61]], [[5n60]], [[5n5z]], [[5n5y]] – yTF RRN3+RRN6+RRN7+RRN11 in RNA polymerase I – Cryo EM<br />
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| }}
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| == References == | | == References == |
| <references/> | | <references/> |
| [[Category:Topic Page]] | | [[Category:Topic Page]] |