User:Mathias Vander Eide/Sandbox 1

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Human Amylin Receptor with Associated RAMP1Human Amylin Receptor with Associated RAMP1

Overall structure of the Amylin GPCR bound to Amylin ligand

This is a default text for your page Mathias Vander Eide/Sandbox 1. Click above on edit this page to modify. Be careful with the < and > signs. You may include any references to papers as in: the use of JSmol in Proteopedia [1] or to the article describing Jmol [2] to the rescue.

Introduction

Function

Disease

Alzheimer's

Relevance

Weight Loss

Structural Components

Calcitonin Receptor

RAMP

Peptide

Bypass Motif

The is a series of residues in the midsection of the amylin peptide that are crucial for providing structural specificity for the AMYR. Without RAMP association, the CTR is in a relaxed, fluid state, allowing the binding of calcitonin. When RAMP binds the receptor, it is forced into a new, rigid conformation, which interferes with calcitonin binding. Amylin's bypass motif


Overlay of sCT (orange) and rAmy (green)

This is a sample scene created with SAT to by Group, and another to make of the protein. You can make your own scenes on SAT starting from scratch or loading and editing one of these sample scenes.


Human AMYR1

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ReferencesReferences

  1. Hanson, R. M., Prilusky, J., Renjian, Z., Nakane, T. and Sussman, J. L. (2013), JSmol and the Next-Generation Web-Based Representation of 3D Molecular Structure as Applied to Proteopedia. Isr. J. Chem., 53:207-216. doi:http://dx.doi.org/10.1002/ijch.201300024
  2. Herraez A. Biomolecules in the computer: Jmol to the rescue. Biochem Mol Biol Educ. 2006 Jul;34(4):255-61. doi: 10.1002/bmb.2006.494034042644. PMID:21638687 doi:10.1002/bmb.2006.494034042644

Student ContributorsStudent Contributors

  • Mathias Vander Eide
  • Andrew Helmerich
  • Ben Whiteside