Proto-oncogene tyrosine-protein kinase

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Function

Non-receptor proto-oncogene tyrosine-protein kinase (NTPK) are enzymes which transfer a phosphate group from ATP to proteins. Protein tyrosine kinases are critical cell signaling enzymes. These enzymes have a highly conserved Arg residue in their catalytic loop which is present two residues or four residues downstream from an absolutely conserved Asp catalytic base. Prior studies on protein tyrosine kinases Csk and Src revealed the potential for chemical rescue of catalytically deficient mutant kinases (Arg to Ala mutations) by small diamino compounds, particularly imidazole; however, the potency and efficiency of rescue was greater for Src. This current study further examines the structural and kinetic basis of rescue for mutant Src as compared to mutant Abl tyrosine kinase. An X-ray crystal structure of R388A Src revealed the surprising finding that a histidine residue of the N-terminus of a symmetry-related kinase inserts into the active site of the adjacent Src and mimics the hydrogen-bonding pattern seen in wild-type protein tyrosine kinases. Abl R367A shows potent and efficient rescue more comparable to Src, even though its catalytic loop is more like that of Csk. Various enzyme redesigns of the active sites indicate that the degree and specificity of rescue are somewhat flexible, but the overall properties of the enzymes and rescue agents play an overearching role. The newly discovered rescue agent 2-aminoimidazole is about as efficient as imidazole in rescuing R/A Src and Abl. Rate vs pH studies with these imidazole analogues suggest that the protonated imidazolium is the preferred form for chemical rescue, consistent with structural models. The efficient rescue seen with mutant Abl points to the potential of this approach to be used effectively to analyze Abl phosphorylation pathways in cells. Ref. 1

Src from chicken contains 1 protein kinase domain, 1 SH2 domain, and 1 SH3 domain. 3GEQ becomes activated when its major tyrosine phosphorylation site is not phosphorylated. Phosphorylation occurs on Tyr-527 by c-Src kinase (CSK); the phosphorylated form is termed pp60c-src. The phosphorylated tail interacts with the SH2 domain thereby repressing kinase activity. It can also be activated by point mutations as well as by truncations at the C-terminal end or by other mutations.

Its subunit structure forms a complex with polyoma virus middle T antigen and interacts with AFAP-110. Interacts with IGF2BP1 Ref. 3. Additionally, it is widely expressed to high levels, and with a high degree of kinase activity in certain fully differentiated cells such as neurons, platelets and macrophages. Isoform 1 is widely expressed. Isoform 2 is expressed only in the muscle.

For details of Proto-oncogene tyrosine-protein kinase SRC see SRC.

Disease

Mutations in RET NTPK are found in multiple endocrine neoplasia and in Hirschsprung's disease[1].

Structural highlights

Chicken (Lys-Glu colored in deepskyblue). The catalytic residues interaction is disrupted by inhibitors which bind to the kinase[2].


3D structures of proto-oncogene tyrosine-protein kinase

See Tyrosine kinase

Chicken proto-oncogene tyrosine-protein kinase Src kinase domain complex with inhibitor 3en4

Drag the structure with the mouse to rotate

ReferencesReferences

[xtra 1]

  1. Muratore KE, Seeliger MA, Wang Z, Fomina D, Neiswinger J, Havranek JJ, Baker D, Kuriyan J, Cole PA. Comparative analysis of mutant tyrosine kinase chemical rescue. Biochemistry. 2009 Apr 21;48(15):3378-86. PMID:19260709 doi:10.1021/bi900057g

[xtra 1]

  1. Lee S, Ayrapetov MK, Kemble DJ, Parang K, Sun G. Docking-based substrate recognition by the catalytic domain of a protein tyrosine kinase, C-terminal Src kinase (Csk). J Biol Chem. 2006 Mar 24;281(12):8183-9. Epub 2006 Jan 26. PMID:16439366 doi:10.1074/jbc.M508120200

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  1. Huttelmaier S, Zenklusen D, Lederer M, Dictenberg J, Lorenz M, Meng X, Bassell GJ, Condeelis J, Singer RH. Spatial regulation of beta-actin translation by Src-dependent phosphorylation of ZBP1. Nature. 2005 Nov 24;438(7067):512-5. PMID:16306994 doi:nature04115

[xtra 1]

  1. Wang D, Huang XY, Cole PA. Molecular determinants for Csk-catalyzed tyrosine phosphorylation of the Src tail. Biochemistry. 2001 Feb 20;40(7):2004-10. PMID:11329267

[xtra 1]

  1. Williams DM, Wang D, Cole PA. Chemical rescue of a mutant protein-tyrosine kinase. J Biol Chem. 2000 Dec 8;275(49):38127-30. PMID:11006267 doi:10.1074/jbc.C000606200

[xtra 1]

  1. Sondhi D, Cole PA. Domain interactions in protein tyrosine kinase Csk. Biochemistry. 1999 Aug 24;38(34):11147-55. PMID:10460171 doi:10.1021/bi990827+

[xtra 1]

  1. Williams JC, Weijland A, Gonfloni S, Thompson A, Courtneidge SA, Superti-Furga G, Wierenga RK. The 2.35 A crystal structure of the inactivated form of chicken Src: a dynamic molecule with multiple regulatory interactions. J Mol Biol. 1997 Dec 19;274(5):757-75. PMID:9405157 doi:10.1006/jmbi.1997.1426

[xtra 1]

  1. Dorai T, Wang LH. An alternative non-tyrosine protein kinase product of the c-src gene in chicken skeletal muscle. Mol Cell Biol. 1990 Aug;10(8):4068-79. PMID:2115117

[xtra 1]

  1. Cooper JA, Gould KL, Cartwright CA, Hunter T. Tyr527 is phosphorylated in pp60c-src: implications for regulation. Science. 1986 Mar 21;231(4744):1431-4. PMID:2420005

[xtra 1]

  1. Takeya T, Hanafusa H. Structure and sequence of the cellular gene homologous to the RSV src gene and the mechanism for generating the transforming virus. Cell. 1983 Mar;32(3):881-90. PMID:6299580


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