FunctionPeptidyl-tRNA hydrolase (PTH) is a bacterial enzyme which cleaves peptidyl-tRNA to free peptide and tRNA[1]. PTH catalyzes the reaction in cases of aborted translation for recycling the tRNA for further rounds of protein synthesis. PTH is essential for bacterial viability.rew)]].
See also Peptidyl-tRNA hydrolase 2, mitochondrial (Hebrew).
Structural highlightsPTH dimer interacts with tRNA at the latter's ; the and the TΨC site (Ψ is pseudouridine) which is the [2].
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3D Structures of peptidyl-tRNA hydrolase3D Structures of peptidyl-tRNA hydrolase
Updated on 05-January-2025
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- Peptidyl-tRNA hydrolase
- 1q7s – hPTH residues 63-179– human
- 2pth – EcPTH – Escherichia coli
- 3ofv – EcPTH (mutant)
- 2rtx – EcPTH GGQ domain
- 1xty – PTH – Pyrococcus abyssi
- 1wn2, 2d3k – PTH – Pyrococcus horikoshii
- 2z2i, 2z2j, 2z2k, 3tck, 3tcn, 3td2, 3td6 – MtPTH – Mycobacterium tuberculosis
- 2jrc – MtPTH – NMR
- 3erj – PTH – Archaeoglobus fulgidus
- 2zv3 – PTH – Mechanocaldococcus jannaschii
- 3kjz, 3kk0, 3p2j, 2naf – MsPTH – Mycobacterium smegmatis
- 2lgj – MsPTH – NMR
- 3nea – PTH – Francisella tularensis
- 3v2i – PTH – Burkholderia thailandesis
- 4dhw, 4djj, 4erx, 4fno, 4fyj, 4jc4, 4qaj – PaPTH – Pseudomonas aeruginosa
- 4fop, 4fot, 4hoy, 4iko, 4jy7, 5y98, 4lwq, 5yl8, 5yla, 5yn4, 5zzv, 6a31, 6ivv, 6iye, 6j93, 6jgu, 6jj1, 6jjq, 6jkx, 6jqt, 6jk8, 6kl8, 6lso, 6lsp, 7csn - AbPTH – Acinetobacter baumannii
- 4olj, 6ix6 – AbPTH (mutant)
- 4p7b – PTH – Salmonella enterica
- 2mjl, 4zxp, 5ivp, 5gvz – VcPTH – Vibrio cholerae
- 4z86, 5b6j, 5ekt, 5ike, 5imb, 5zk0 – VcPTH (mutant)
- 4qt4 – PTH – Streptococcus pyogenes
- 4yly – PTH – Streptococcus aureus
- 5zx8 – PTH – Thermus thermophilus
- 7brd – PTH – Klebsiella pneumoniae
- Peptidyl-tRNA hydrolase complex
- 3vjr – EcPTH + tRNA CCA acceptor domain
- 4jwk, 5y9a – AbPTH + cytidine derivative
- 4qd3 – PaPTH + cytidine derivative
- 4jx9 – AbPTH + uridine
- 4qbk – PaPTH + adenosine derivative
- 8axp – PTH + thyazole derivative – Neisseria gonorrhoeae
ReferencesReferences
- ↑ Das G, Varshney U. Peptidyl-tRNA hydrolase and its critical role in protein biosynthesis. Microbiology. 2006 Aug;152(Pt 8):2191-5. PMID:16849786 doi:http://dx.doi.org/10.1099/mic.0.29024-0
- ↑ Ito K, Murakami R, Mochizuki M, Qi H, Shimizu Y, Miura KI, Ueda T, Uchiumi T. Structural basis for the substrate recognition and catalysis of peptidyl-tRNA hydrolase. Nucleic Acids Res. 2012 Aug 25. PMID:22923517 doi:10.1093/nar/gks790
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