8aew

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Malonyl-CoA reductase from Chloroflexus aurantiacus - N-terminal ApoMalonyl-CoA reductase from Chloroflexus aurantiacus - N-terminal Apo

Structural highlights

8aew is a 2 chain structure with sequence from Chloroflexus aurantiacus J-10-fl. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.72Å
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Publication Abstract from PubMed

Malonyl-Coenzyme A Reductase (MCR) in Chloroflexus aurantiacus, a characteristic enzyme of the 3-hydroxypropionate (3-HP) cycle, catalyses the reduction of malonyl-CoA to 3-HP. MCR is a bi-functional enzyme; in the first step, malonyl-CoA is reduced to the free intermediate malonate semialdehyde by the C-terminal region of MCR, and this is further reduced to 3-HP by the N-terminal region of MCR. Here we present the crystal structures of both N-terminal and C-terminal regions of the MCR from C. aurantiacus. A catalytic mechanism is suggested by ligand and substrate bound structures, and structural and kinetic studies of MCR variants. Both MCR structures reveal one catalytic, and one non-catalytic SDR (short chain dehydrogenase/reductase) domain. C-terminal MCR has a lid domain which undergoes a conformational change and controls the reaction. In the proposed mechanism of the C-terminal MCR, the conversion of malonyl-CoA to malonate semialdehyde is based on the reduction of malonyl-CoA by NADPH, followed by the decomposition of the hemithioacetal to produce malonate semialdehyde and coenzyme A. Conserved arginines, Arg734 and Arg773 are proposed to play key roles in the mechanism and conserved Ser719, and Tyr737 are other essential residues forming an oxyanion hole for the substrate intermediates.

Dynamic lid domain of Chloroflexus aurantiacus Malonyl-CoA reductase controls the reaction.,Kabasakal BV, Cotton CAR, Murray JW Biochimie. 2024 Apr;219:12-20. doi: 10.1016/j.biochi.2023.11.003. Epub 2023 Nov , 10. PMID:37952891[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

  1. Kabasakal BV, Cotton CAR, Murray JW. Dynamic lid domain of Chloroflexus aurantiacus Malonyl-CoA reductase controls the reaction. Biochimie. 2024 Apr;219:12-20. PMID:37952891 doi:10.1016/j.biochi.2023.11.003

8aew, resolution 2.72Å

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