6z3y

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CryoEM structure of horse sodium/proton exchanger NHE9 in an inward-facing conformationCryoEM structure of horse sodium/proton exchanger NHE9 in an inward-facing conformation

Structural highlights

6z3y is a 2 chain structure with sequence from Equus caballus. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:Electron Microscopy, Resolution 3.51Å
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

F7B113_HORSE

Publication Abstract from PubMed

Na(+) /H(+) exchangers (NHEs) are ancient membrane-bound nanomachines that work to regulate intracellular pH, sodium levels and cell volume. NHE activities contribute to the control of the cell cycle, cell proliferation, cell migration and vesicle trafficking. NHE dysfunction has been linked to many diseases, and they are targets of pharmaceutical drugs. Despite their fundamental importance to cell homeostasis and human physiology, structural information for the mammalian NHEs was lacking. Here, we report the cryogenic electron microscopy structure of NHE isoform 9 (SLC9A9) from Equus caballus at 3.2 A resolution, an endosomal isoform highly expressed in the brain and associated with autism spectrum (ASD) and attention deficit hyperactivity (ADHD) disorders. Despite low sequence identity, the NHE9 architecture and ion-binding site are remarkably most similar to distantly related bacterial Na(+) /H(+) antiporters with 13 transmembrane segments. Collectively, we reveal the conserved architecture of the NHE ion-binding site, their elevator-like structural transitions, the functional implications of autism disease mutations and the role of phosphoinositide lipids to promote homodimerization that, together, have important physiological ramifications.

Structure and elevator mechanism of the mammalian sodium/proton exchanger NHE9.,Winkelmann I, Matsuoka R, Meier PF, Shutin D, Zhang C, Orellana L, Sexton R, Landreh M, Robinson CV, Beckstein O, Drew D EMBO J. 2020 Oct 29:e105908. doi: 10.15252/embj.2020105908. PMID:33118634[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

  1. Winkelmann I, Matsuoka R, Meier PF, Shutin D, Zhang C, Orellana L, Sexton R, Landreh M, Robinson CV, Beckstein O, Drew D. Structure and elevator mechanism of the mammalian sodium/proton exchanger NHE9. EMBO J. 2020 Oct 29:e105908. doi: 10.15252/embj.2020105908. PMID:33118634 doi:http://dx.doi.org/10.15252/embj.2020105908

6z3y, resolution 3.51Å

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OCA