6ypz

From Proteopedia
Jump to navigation Jump to search

Promiscuous Reductase LugOII Catalyzes Keto-reduction at C1 during Lugdunomycin BiosynthesisPromiscuous Reductase LugOII Catalyzes Keto-reduction at C1 during Lugdunomycin Biosynthesis

Structural highlights

6ypz is a 2 chain structure with sequence from Streptomyces sp. QL37. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.08Å
Ligands:, ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

A0A2S6PN47_9ACTN

Publication Abstract from PubMed

Angucyclines are a structurally diverse class of actinobacterial natural products defined by their varied polycyclic ring systems, which display a wide range of biological activities. We recently discovered lugdunomycin (1), a highly rearranged polyketide antibiotic derived from the angucycline backbone that is synthesized via several yet unexplained enzymatic reactions. Here, we show via in vivo, in vitro, and structural analysis that the promiscuous reductase LugOII catalyzes both a C6 and an unprecedented C1 ketoreduction. This then sets the stage for the subsequent C-ring cleavage that is key to the rearranged scaffolds of 1. The 1.1 A structures of LugOII in complex with either ligand 8-O-Methylrabelomycin (4) or 8-O-Methyltetrangomycin (5) and of apoenzyme were resolved, which revealed a canonical Rossman fold and a remarkable conformational change during substrate capture and release. Mutational analysis uncovered key residues for substrate access, position, and catalysis as well as specific determinants that control its dual functionality. The insights obtained in this work hold promise for the discovery and engineering of other promiscuous reductases that may be harnessed for the generation of novel biocatalysts for chemoenzymatic applications.

Functional and Structural Insights into a Novel Promiscuous Ketoreductase of the Lugdunomycin Biosynthetic Pathway.,Xiao X, Elsayed SS, Wu C, van der Heul HU, Metsa-Ketela M, Du C, Prota AE, Chen CC, Liu W, Guo RT, Abrahams JP, van Wezel GP ACS Chem Biol. 2020 Sep 8. doi: 10.1021/acschembio.0c00564. PMID:32840360[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

  1. Xiao X, Elsayed SS, Wu C, van der Heul HU, Metsa-Ketela M, Du C, Prota AE, Chen CC, Liu W, Guo RT, Abrahams JP, van Wezel GP. Functional and Structural Insights into a Novel Promiscuous Ketoreductase of the Lugdunomycin Biosynthetic Pathway. ACS Chem Biol. 2020 Sep 8. doi: 10.1021/acschembio.0c00564. PMID:32840360 doi:http://dx.doi.org/10.1021/acschembio.0c00564

6ypz, resolution 1.08Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA