6wb3

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Crystal structure of coiled coil region of human septin 4Crystal structure of coiled coil region of human septin 4

Structural highlights

6wb3 is a 2 chain structure. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:,
NonStd Res:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

[SEPT4_HUMAN] Filament-forming cytoskeletal GTPase (By similarity). May play a role in cytokinesis (Potential). Forms a filamentous structure with SEPTIN12, SEPTIN6, SEPTIN2 and probably SEPTIN4 at the sperm annulus which is required for the structural integrity and motility of the sperm tail during postmeiotic differentiation (PubMed:25588830). May play a role in platelet secretion. Isoform ARTS, but not the other isoforms, is required for the induction of cell death mediated by TGF-beta and by other apoptotic stimuli.[1] [2] [3] [4] [5] [6]

Publication Abstract from PubMed

Septins are an example of subtle molecular recognition whereby different paralogues must correctly assemble into functional filaments important for essential cellular events such as cytokinesis. Most possess C-terminal domains capable of forming coiled coils which are believed to be involved in filament formation and bundling. Here, we report an integrated structural approach which aims to unravel their architectural diversity and in so doing provide direct structural information for the coiled-coil regions of five human septins. Unexpectedly, we encounter dimeric structures presenting both parallel and antiparallel arrangements which are in consonance with molecular modelling suggesting that both are energetically accessible. These sequences therefore code for two metastable states of different orientations which employ different but overlapping interfaces. The antiparallel structures present a mixed coiled-coil interface, one side of which is dominated by a continuous chain of core hydrophilic residues. This unusual type of coiled coil could be used to expand the toolkit currently available to the protein engineer for the design of previously unforeseen coiled-coil based assemblies. Within a physiological context, our data provide the first atomic details related to the assumption that the parallel orientation is likely formed between septin monomers from the same filament whilst antiparallelism may participate in the widely described interfilament cross bridges necessary for higher order structures and thereby septin function.

Orientational Ambiguity in Septin Coiled Coils and its Structural Basis.,Leonardo DA, Cavini IA, Sala FA, Mendonca DC, Rosa HVD, Kumagai PS, Crusca E Jr, Valadares NF, Marques IA, Brandao-Neto J, Munte CE, Kalbitzer HR, Soler N, Uson I, Andre I, Araujo APU, D'Muniz Pereira H, Garratt RC J Mol Biol. 2021 Feb 24;433(9):166889. doi: 10.1016/j.jmb.2021.166889. PMID:33639214[7]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

  1. Larisch S, Yi Y, Lotan R, Kerner H, Eimerl S, Tony Parks W, Gottfried Y, Birkey Reffey S, de Caestecker MP, Danielpour D, Book-Melamed N, Timberg R, Duckett CS, Lechleider RJ, Steller H, Orly J, Kim SJ, Roberts AB. A novel mitochondrial septin-like protein, ARTS, mediates apoptosis dependent on its P-loop motif. Nat Cell Biol. 2000 Dec;2(12):915-21. doi: 10.1038/35046566. PMID:11146656 doi:http://dx.doi.org/10.1038/35046566
  2. Gottfried Y, Rotem A, Lotan R, Steller H, Larisch S. The mitochondrial ARTS protein promotes apoptosis through targeting XIAP. EMBO J. 2004 Apr 7;23(7):1627-35. doi: 10.1038/sj.emboj.7600155. Epub 2004 Mar, 18. PMID:15029247 doi:http://dx.doi.org/10.1038/sj.emboj.7600155
  3. Blaser S, Horn J, Wurmell P, Bauer H, Strumpell S, Nurden P, Pagenstecher A, Busse A, Wunderle D, Hainmann I, Zieger B. The novel human platelet septin SEPT8 is an interaction partner of SEPT4. Thromb Haemost. 2004 May;91(5):959-66. doi: 10.1160/TH03-09-0578. PMID:15116257 doi:http://dx.doi.org/10.1160/TH03-09-0578
  4. Lotan R, Rotem A, Gonen H, Finberg JP, Kemeny S, Steller H, Ciechanover A, Larisch S. Regulation of the proapoptotic ARTS protein by ubiquitin-mediated degradation. J Biol Chem. 2005 Jul 8;280(27):25802-10. doi: 10.1074/jbc.M501955200. Epub 2005 , Apr 18. PMID:15837787 doi:http://dx.doi.org/10.1074/jbc.M501955200
  5. Paavola P, Horelli-Kuitunen N, Palotie A, Peltonen L. Characterization of a novel gene, PNUTL2, on human chromosome 17q22-q23 and its exclusion as the Meckel syndrome gene. Genomics. 1999 Jan 1;55(1):122-5. PMID:9889007 doi:http://dx.doi.org/S0888-7543(98)95612-9
  6. Kuo YC, Shen YR, Chen HI, Lin YH, Wang YY, Chen YR, Wang CY, Kuo PL. SEPT12 orchestrates the formation of mammalian sperm annulus by organizing core octameric complexes with other SEPT proteins. J Cell Sci. 2015 Mar 1;128(5):923-34. doi: 10.1242/jcs.158998. Epub 2015 Jan 14. PMID:25588830 doi:http://dx.doi.org/10.1242/jcs.158998
  7. Leonardo DA, Cavini IA, Sala FA, Mendonca DC, Rosa HVD, Kumagai PS, Crusca E Jr, Valadares NF, Marques IA, Brandao-Neto J, Munte CE, Kalbitzer HR, Soler N, Uson I, Andre I, Araujo APU, D'Muniz Pereira H, Garratt RC. Orientational Ambiguity in Septin Coiled Coils and its Structural Basis. J Mol Biol. 2021 Feb 24;433(9):166889. doi: 10.1016/j.jmb.2021.166889. PMID:33639214 doi:http://dx.doi.org/10.1016/j.jmb.2021.166889

6wb3, resolution 1.35Å

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