6mrq

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Structure of ToPI1 inhibitor from Tityus obscurus scorpion venom in complex with trypsinStructure of ToPI1 inhibitor from Tityus obscurus scorpion venom in complex with trypsin

Structural highlights

6mrq is a 2 chain structure with sequence from Bos taurus and Tityus. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.288Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Publication Abstract from PubMed

Peptidase inhibitors (PIs) have been broadly studied due to their wide therapeutic potential for human diseases. A potent trypsin inhibitor from Tityus obscurus scorpion venom was characterized and named ToPI1, with 33 amino acid residues and three disulfide bonds. The X-ray structure of the ToPI1:trypsin complex, in association with the mass spectrometry data, indicate a sequential set of events: the complex formation with the inhibitor Lys(32) in the trypsin S1 pocket, the inhibitor C-terminal residue Ser(33) cleavage, and the cyclization of ToPI1 via a peptide bond between residues Ile(1) and Lys(32). Kinetic and thermodynamic characterization of the complex was obtained. ToPI1 shares no sequence similarity with other PIs characterized to date and is the first PI with CS-alpha/beta motif described from animal venoms. In its cyclic form, it shares structural similarities with plant cyclotides that also inhibit trypsin. These results bring new insights for studies with venom compounds, PIs, and drug design.

Head-to-Tail Cyclization after Interaction with Trypsin: A Scorpion Venom Peptide that Resembles Plant Cyclotides.,Mourao CBF, Brand GD, Fernandes JPC, Prates MV, Bloch C Jr, Barbosa JARG, Freitas SM, Restano-Cassulini R, Possani LD, Schwartz EF J Med Chem. 2020 Aug 12. doi: 10.1021/acs.jmedchem.0c00686. PMID:32787139[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

See Also

References

  1. Mourão CBF, Brand GD, Fernandes JPC, Prates MV, Bloch C Jr, Barbosa JARG, Freitas SM, Restano-Cassulini R, Possani LD, Schwartz EF. Head-to-Tail Cyclization after Interaction with Trypsin: A Scorpion Venom Peptide that Resembles Plant Cyclotides. J Med Chem. 2020 Sep 10;63(17):9500-9511. PMID:32787139 doi:10.1021/acs.jmedchem.0c00686

6mrq, resolution 1.29Å

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OCA