5xty

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Crystal Structure of 11S allergen from Cocos nucifera L.Crystal Structure of 11S allergen from Cocos nucifera L.

Structural highlights

5xty is a 2 chain structure with sequence from Cocos nucifera. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Publication Abstract from PubMed

Allergy is an abnormal immune response against an innocuous target. Food allergy is an adverse reaction caused by common foods most well-known being those involving peanuts. Apart from mono sensitized food allergy, cross-reactivity with other food allergens is also commonly observed. To understand the phenomenon of cross-reactivity related to immune response, three dimensional structures of the allergens and their antigenic epitopes has to be analysed in detail. The X-ray crystal structure of Cocosin, a common 11S food allergen from coconut, has been determined at 2.2A resolution using molecular replacement technique. The monomer of 52kDa is composed of two beta-jelly roll domains, one with acidic and the other with basic character. The structure shows hexameric association with two trimers facing each other. Though the overall structure of Cocosin is similar to other 11S allergens, the occurrence of experimentally determined epitopes of the peanut allergen Ara h 3 at flexible as well as variable regions could be the reason for the clinically reported result of cross-reactivity that the peanut allergic patients are not sensitized with coconut allergen.

Crystal structure determination and analysis of 11S coconut allergen: Cocosin.,Vajravijayan S, Nandhagopal N, Gunasekaran K Mol Immunol. 2017 Dec;92:132-135. doi: 10.1016/j.molimm.2017.10.018. Epub 2017, Oct 31. PMID:29096167[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

  1. Vajravijayan S, Nandhagopal N, Gunasekaran K. Crystal structure determination and analysis of 11S coconut allergen: Cocosin. Mol Immunol. 2017 Dec;92:132-135. doi: 10.1016/j.molimm.2017.10.018. Epub 2017, Oct 31. PMID:29096167 doi:http://dx.doi.org/10.1016/j.molimm.2017.10.018

5xty, resolution 2.20Å

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OCA