5ns6

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Crystal structure of beta-glucosidase BglM-G1 from marine metagenomeCrystal structure of beta-glucosidase BglM-G1 from marine metagenome

Structural highlights

5ns6 is a 3 chain structure with sequence from Marine metagenome. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.5Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Publication Abstract from PubMed

Salt bridges are the strongest electrostatic interactions in proteins. They substantially contribute to a protein's structural stability. Thus, mutations of salt bridges are typically selected against. Here, we report on the evolutionary loss of a highly conserved salt bridge in the GH1 family glycosyl hydrolase BglM-G1. BglM-G1's gene was found in the bacterial metagenome of a temperate, seasonally cold marine habitat. In BglM-G1, arginine 75 is replaced by a histidine. While fully retaining beta-glucosidase activity, BglM-G1 is less heat stable than an H75R variant, in which the salt bridge was artificially re-introduced. However, the K m toward its substrates was lower in wild type, leading to an overall higher catalytic efficiency. Our results indicate that this loss of the salt bridge leads to higher flexibility in BglM-G1's active site, trading structural stability at high temperatures, a trait not needed in a temperate, seasonally cold habitat, for a more effective catalytic activity.

Loss of a conserved salt bridge in bacterial glycosyl hydrolase BgIM-G1 improves substrate binding in temperate environments.,Mhaindarkar D, Gasper R, Lupilov N, Hofmann E, Leichert LI Commun Biol. 2018 Oct 17;1:171. doi: 10.1038/s42003-018-0167-7. eCollection 2018. PMID:30345395[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

See Also

References

  1. Mhaindarkar D, Gasper R, Lupilov N, Hofmann E, Leichert LI. Loss of a conserved salt bridge in bacterial glycosyl hydrolase BgIM-G1 improves substrate binding in temperate environments. Commun Biol. 2018 Oct 17;1:171. doi: 10.1038/s42003-018-0167-7. eCollection 2018. PMID:30345395 doi:http://dx.doi.org/10.1038/s42003-018-0167-7

5ns6, resolution 1.50Å

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OCA