4tz7

From Proteopedia
Jump to navigation Jump to search

Crystal structure of type I phosphatidylinositol 4-phosphate 5-kinase alpha from ZebrafishCrystal structure of type I phosphatidylinositol 4-phosphate 5-kinase alpha from Zebrafish

Structural highlights

4tz7 is a 1 chain structure with sequence from Danio rerio. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 3.31Å
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

Q503I3_DANRE

Publication Abstract from PubMed

Type I phosphatidylinositol phosphate kinase (PIP5K1) phosphorylates the head group of phosphatidylinositol 4-phosphate (PtdIns4P) to generate PtdIns4,5P2, which plays important roles in a wide range of cellular functions including Wnt signalling. However, the lack of its structural information has hindered the understanding of its regulation. Here we report the crystal structure of the catalytic domain of zebrafish PIP5K1A at 3.3 A resolution. This molecule forms a side-to-side dimer. Mutagenesis study of PIP5K1A reveals two adjacent interfaces for the dimerization and interaction with the DIX domain of the Wnt signalling molecule dishevelled. Although these interfaces are located distally to the catalytic/substrate-binding site, binding to these interfaces either through dimerization or the interaction with DIX stimulates PIP5K1 catalytic activity. DIX binding additionally enhances PIP5K1 substrate binding. Thus, this study elucidates regulatory mechanisms for this lipid kinase and provides a paradigm for the understanding of PIP5K1 regulation by their interacting molecules.

Resolution of structure of PIP5K1A reveals molecular mechanism for its regulation by dimerization and dishevelled.,Hu J, Yuan Q, Kang X, Qin Y, Li L, Ha Y, Wu D Nat Commun. 2015 Sep 14;6:8205. doi: 10.1038/ncomms9205. PMID:26365782[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

  1. Hu J, Yuan Q, Kang X, Qin Y, Li L, Ha Y, Wu D. Resolution of structure of PIP5K1A reveals molecular mechanism for its regulation by dimerization and dishevelled. Nat Commun. 2015 Sep 14;6:8205. doi: 10.1038/ncomms9205. PMID:26365782 doi:http://dx.doi.org/10.1038/ncomms9205

4tz7, resolution 3.31Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA