4pmh

From Proteopedia
Jump to navigation Jump to search

The structure of rice weevil pectin methyl esteraseThe structure of rice weevil pectin methyl esterase

Structural highlights

4pmh is a 1 chain structure with sequence from Sitophilus oryzae. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.79Å
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

PME_SITOR Pectinesterase which probably plays an important role in the digestion of plant cell walls.[1]

Publication Abstract from PubMed

Rice weevils (Sitophilus oryzae) use a pectin methylesterase (EC 3.1.1.11), along with other enzymes, to digest cell walls in cereal grains. The enzyme is a right-handed beta-helix protein, but is circularly permuted relative to plant and bacterial pectin methylesterases, as shown by the crystal structure determination reported here. This is the first structure of an animal pectin methylesterase. Diffraction data were collected to 1.8 A resolution some time ago for this crystal form, but structure solution required the use of molecular-replacement techniques that have been developed and similar structures that have been deposited in the last 15 years. Comparison of the structure of the rice weevil pectin methylesterase with that from Dickeya dandantii (formerly Erwinia chrysanthemi) indicates that the reaction mechanisms are the same for the insect, plant and bacterial pectin methylesterases. The similarity of the structure of the rice weevil enzyme to the Escherichia coli lipoprotein YbhC suggests that the evolutionary origin of the rice weevil enzyme was a bacterial lipoprotein, the gene for which was transferred to a primitive ancestor of modern weevils and other Curculionidae. Structural comparison of the rice weevil pectin methylesterase with plant and bacterial enzymes demonstrates that the rice weevil protein is circularly permuted relative to the plant and bacterial molecules.

The structure of rice weevil pectin methylesterase.,Teller DC, Behnke CA, Pappan K, Shen Z, Reese JC, Reeck GR, Stenkamp RE Acta Crystallogr F Struct Biol Commun. 2014 Nov;70(Pt 11):1480-4. doi:, 10.1107/S2053230X14020433. Epub 2014 Oct 25. PMID:25372813[2]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

  1. Shen Z, Pappan K, Mutti NS, He QJ, Denton M, Zhang Y, Kanost MR, Reese JC, Reeck GR. Pectinmethylesterase from the rice weevil, Sitophilus oryzae: cDNA isolation and sequencing, genetic origin, and expression of the recombinant enzyme. J Insect Sci. 2005;5:21. PMID:16341253 doi:10.1093/jis/5.1.21
  2. Teller DC, Behnke CA, Pappan K, Shen Z, Reese JC, Reeck GR, Stenkamp RE. The structure of rice weevil pectin methylesterase. Acta Crystallogr F Struct Biol Commun. 2014 Nov;70(Pt 11):1480-4. doi:, 10.1107/S2053230X14020433. Epub 2014 Oct 25. PMID:25372813 doi:http://dx.doi.org/10.1107/S2053230X14020433

4pmh, resolution 1.79Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA