4j0n

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Crystal structure of a manganese dependent isatin hydrolaseCrystal structure of a manganese dependent isatin hydrolase

Structural highlights

4j0n is a 2 chain structure with sequence from Roseibium aggregatum IAM 12614. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.25Å
Ligands:, ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

ISAHY_ROSAI Involved in the degradation of the plant hormone indole-3-acetic acid (IAA). Catalyzes the hydrolysis of the cyclic amide bond (lactam) of isatin (1H-indole-2,3-dione) to yield isatinate (2-(2-aminophenyl)-2-oxoacetate).[1]

Publication Abstract from PubMed

The high resolution crystal structures of isatin hydrolase from Labrenzia aggregata in the apo and the product state, are described. These are the first structures of a functionally characterized metal-dependent hydrolase of this fold. Isatin hydrolase converts isatin to isatinate and belongs to a novel family of metalloenzymes that include the bacterial kynurenine formamidase. The product state, mimicked by bound thioisatinate, reveals a water molecule that bridges the thioisatinate to a proton wire in an adjacent water channel and thus allows the proton released by the reaction to escape only when the product is formed. The functional proton wire present in IH-b represents a unique catalytic feature common to all hydrolases is here trapped and visualized for the first time. The local molecular environment required to coordinate thioisatinate allows stronger and more confident identification of orthologous genes encoding isatin hydrolases within the prokaryotic kingdom. The isatin hydrolase orthologues found in human gut bacteria raise the question as to whether the indole-3-acetic acid degradation pathway is present in human gut flora.

A proton wire and water channel revealed in the crystal structure of isatin hydrolase.,Bjerregaard-Andersen K, Sommer T, Jensen JK, Jochimsen B, Etzerodt M, Morth JP J Biol Chem. 2014 Jun 10. pii: jbc.M114.568824. PMID:24917679[2]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

  1. Bjerregaard-Andersen K, Sommer T, Jensen JK, Jochimsen B, Etzerodt M, Morth JP. A proton wire and water channel revealed in the crystal structure of isatin hydrolase. J Biol Chem. 2014 Jun 10. pii: jbc.M114.568824. PMID:24917679 doi:http://dx.doi.org/10.1074/jbc.M114.568824
  2. Bjerregaard-Andersen K, Sommer T, Jensen JK, Jochimsen B, Etzerodt M, Morth JP. A proton wire and water channel revealed in the crystal structure of isatin hydrolase. J Biol Chem. 2014 Jun 10. pii: jbc.M114.568824. PMID:24917679 doi:http://dx.doi.org/10.1074/jbc.M114.568824

4j0n, resolution 2.25Å

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