3hi8

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Crystal structure of proliferating cell nuclear antigen (PCNA) from Haloferax volcaniiCrystal structure of proliferating cell nuclear antigen (PCNA) from Haloferax volcanii

Structural highlights

3hi8 is a 6 chain structure with sequence from Haloferax volcanii. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 3.202Å
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

D0VWY8_HALVO Sliding clamp subunit that acts as a moving platform for DNA processing. Responsible for tethering the catalytic subunit of DNA polymerase and other proteins to DNA during high-speed replication (By similarity).[HAMAP-Rule:MF_00317]

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

Publication Abstract from PubMed

The sliding clamp proliferating cell nuclear antigen (PCNA) plays vital roles in many aspects of DNA replication and repair in eukaryotic cells and in archaea. Realising the full potential of archaea as a model for PCNA function requires a combination of biochemical and genetic approaches. In order to provide a platform for subsequent reverse genetic analysis, PCNA from the halophilic archaeon Haloferax volcanii was subjected to crystallographic analysis. The gene was cloned and expressed in Escherichia coli and the protein was purified by affinity chromatography and crystallized by the vapour-diffusion technique. The structure was determined by molecular replacement and refined at 3.5 A resolution to a final R factor of 23.7% (R(free) = 25%). PCNA from H. volcanii was found to be homotrimeric and to resemble other homotrimeric PCNA clamps but with several differences that appear to be associated with adaptation of the protein to the high intracellular salt concentrations found in H. volcanii cells.

Structural insights into the adaptation of proliferating cell nuclear antigen (PCNA) from Haloferax volcanii to a high-salt environment.,Morgunova E, Gray FC, Macneill SA, Ladenstein R Acta Crystallogr D Biol Crystallogr. 2009 Oct;65(Pt 10):1081-8. Epub 2009, Sep 16. PMID:19770505[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

See Also

References

  1. Morgunova E, Gray FC, Macneill SA, Ladenstein R. Structural insights into the adaptation of proliferating cell nuclear antigen (PCNA) from Haloferax volcanii to a high-salt environment. Acta Crystallogr D Biol Crystallogr. 2009 Oct;65(Pt 10):1081-8. Epub 2009, Sep 16. PMID:19770505 doi:10.1107/S0907444909029321

3hi8, resolution 3.20Å

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OCA