2z8r

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Crystal structure of rhamnogalacturonan lyase YesW at 1.40 A resolutionCrystal structure of rhamnogalacturonan lyase YesW at 1.40 A resolution

Structural highlights

2z8r is a 2 chain structure with sequence from Bacillus subtilis. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.4Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

YESW_BACSU Pectinolytic enzyme that degrades type I rhamnogalacturonan from plant cell walls and releases oligosaccharide products. Degrades rhamnogalacturonan, polygalacturonic acid, pectic acid and pectin.[1] [2]

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

References

  1. ↑ Ochiai A, Yamasaki M, Itoh T, Mikami B, Hashimoto W, Murata K. Crystallization and preliminary X-ray analysis of the rhamnogalacturonan lyase YesW from Bacillus subtilis strain 168, a member of polysaccharide lyase family 11. Acta Crystallogr Sect F Struct Biol Cryst Commun. 2006 May 1;62(Pt 5):438-40., Epub 2006 Apr 12. PMID:16682770 doi:http://dx.doi.org/10.1107/S1744309106011894
  2. ↑ Ochiai A, Itoh T, Kawamata A, Hashimoto W, Murata K. Plant cell wall degradation by saprophytic Bacillus subtilis strains: gene clusters responsible for rhamnogalacturonan depolymerization. Appl Environ Microbiol. 2007 Jun;73(12):3803-13. Epub 2007 Apr 20. PMID:17449691 doi:http://dx.doi.org/10.1128/AEM.00147-07

2z8r, resolution 1.40Å

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