2x8a

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Human Nuclear Valosin containing protein Like (NVL), C-terminal AAA- ATPase domainHuman Nuclear Valosin containing protein Like (NVL), C-terminal AAA- ATPase domain

Structural highlights

2x8a is a 1 chain structure with sequence from Homo sapiens. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.6Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

NVL_HUMAN Participates in the assembly of the telomerase holoenzyme and effecting of telomerase activity via its interaction with TERT (PubMed:22226966). Involved in both early and late stages of the pre-rRNA processing pathways (PubMed:26166824). Spatiotemporally regulates 60S ribosomal subunit biogenesis in the nucleolus (PubMed:15469983, PubMed:16782053, PubMed:29107693, PubMed:26456651). Catalyzes the release of specific assembly factors, such as WDR74, from pre-60S ribosomal particles through the ATPase activity (PubMed:29107693, PubMed:26456651, PubMed:28416111).[1] [2] [3] [4] [5] [6] [7]

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

References

  1. Nagahama M, Hara Y, Seki A, Yamazoe T, Kawate Y, Shinohara T, Hatsuzawa K, Tani K, Tagaya M. NVL2 is a nucleolar AAA-ATPase that interacts with ribosomal protein L5 through its nucleolar localization sequence. Mol Biol Cell. 2004 Dec;15(12):5712-23. doi: 10.1091/mbc.e04-08-0692. Epub 2004, Oct 6. PMID:15469983 doi:http://dx.doi.org/10.1091/mbc.e04-08-0692
  2. Nagahama M, Yamazoe T, Hara Y, Tani K, Tsuji A, Tagaya M. The AAA-ATPase NVL2 is a component of pre-ribosomal particles that interacts with the DExD/H-box RNA helicase DOB1. Biochem Biophys Res Commun. 2006 Aug 4;346(3):1075-82. doi:, 10.1016/j.bbrc.2006.06.017. Epub 2006 Jun 12. PMID:16782053 doi:http://dx.doi.org/10.1016/j.bbrc.2006.06.017
  3. Her J, Chung IK. The AAA-ATPase NVL2 is a telomerase component essential for holoenzyme assembly. Biochem Biophys Res Commun. 2012 Jan 20;417(3):1086-92. doi:, 10.1016/j.bbrc.2011.12.101. Epub 2011 Dec 27. PMID:22226966 doi:http://dx.doi.org/10.1016/j.bbrc.2011.12.101
  4. Yoshikatsu Y, Ishida Y, Sudo H, Yuasa K, Tsuji A, Nagahama M. NVL2, a nucleolar AAA-ATPase, is associated with the nuclear exosome and is involved in pre-rRNA processing. Biochem Biophys Res Commun. 2015 Aug 28;464(3):780-6. doi:, 10.1016/j.bbrc.2015.07.032. Epub 2015 Jul 10. PMID:26166824 doi:http://dx.doi.org/10.1016/j.bbrc.2015.07.032
  5. Hiraishi N, Ishida Y, Nagahama M. AAA-ATPase NVL2 acts on MTR4-exosome complex to dissociate the nucleolar protein WDR74. Biochem Biophys Res Commun. 2015 Nov 20;467(3):534-40. doi:, 10.1016/j.bbrc.2015.09.160. Epub 2015 Oct 8. PMID:26456651 doi:http://dx.doi.org/10.1016/j.bbrc.2015.09.160
  6. Lo YH, Romes EM, Pillon MC, Sobhany M, Stanley RE. Structural Analysis Reveals Features of Ribosome Assembly Factor Nsa1/WDR74 Important for Localization and Interaction with Rix7/NVL2. Structure. 2017 May 2;25(5):762-772.e4. doi: 10.1016/j.str.2017.03.008. Epub 2017, Apr 13. PMID:28416111 doi:http://dx.doi.org/10.1016/j.str.2017.03.008
  7. Hiraishi N, Ishida YI, Sudo H, Nagahama M. WDR74 participates in an early cleavage of the pre-rRNA processing pathway in cooperation with the nucleolar AAA-ATPase NVL2. Biochem Biophys Res Commun. 2018 Jan 1;495(1):116-123. doi:, 10.1016/j.bbrc.2017.10.148. Epub 2017 Oct 28. PMID:29107693 doi:http://dx.doi.org/10.1016/j.bbrc.2017.10.148

2x8a, resolution 2.60Å

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OCA