H1N1 Swine Flu Multiple Sequence Alignment of MP2 Protein, 64 sequencesH1N1 Swine Flu Multiple Sequence Alignment of MP2 Protein, 64 sequences
| Protein
|
Polymorphism
|
Strain with Polymorphism
|
Number of Strains with Polymorphism
|
| MP2
|
L3P
|
227831764_A/California/05/2
|
1
|
| MP2
|
Y52H
|
229609551_A/Stockholm/28/20
|
1
|
|
| MP2
|
T65M
|
229536073_A/Texas/07/2009
|
1
|
| MP2
|
S82N
|
237511788_A/Mexico/4108/200
|
1
|
gi|229892724_A/Canada-NS/RV153 MSLLTEVETPTRSEWECRCSDSSDPLVIAANIIGILHLILWITDRLFFKC 50
gi|229368682_A/Denmark/513/200 MSLLTEVETPTRSEWECRCSDSSDPLVIAANIIGILHLILWITDRLFFKC 50
gi|229299506_A/Texas/05/2009 MSLLTEVETPTRSEWECRCSDSSDPLVIAANIIGILHLILWITDRLFFKC 50
gi|227977141_A/California/07/2 MSLLTEVETPTRSEWECRCSDSSDPLVIAANIIGILHLILWITDRLFFKC 50
gi|227977109_A/California/04/2 MSLLTEVETPTRSEWECRCSDSSDPLVIAANIIGILHLILWITDRLFFKC 50
gi|227977121_A/California/08/2 MSLLTEVETPTRSEWECRCSDSSDPLVIAANIIGILHLILWITDRLFFKC 50
gi|229396490_A/Ohio/07/2009 MSLLTEVETPTRSEWECRCSDSSDPLVIAANIIGILHLILWITDRLFFKC 50
gi|229396474_A/New_York/19/200 MSLLTEVETPTRSEWECRCSDSSDPLVIAANIIGILHLILWITDRLFFKC 50
gi|229396458_A/Texas/06/2009 MSLLTEVETPTRSEWECRCSDSSDPLVIAANIIGILHLILWITDRLFFKC 50
gi|229396370_A/New_York/11/200 MSLLTEVETPTRSEWECRCSDSSDPLVIAANIIGILHLILWITDRLFFKC 50
gi|229484037_A/Mexico/InDRE448 MSLLTEVETPTRSEWECRCSDSSDPLVIAANIIGILHLILWITDRLFFKC 50
gi|229462699_A/Valencia/GP4/20 MSLLTEVETPTRSEWECRCSDSSDPLVIAANIIGILHLILWITDRLFFKC 50
gi|229462687_A/Castilla-La_Man MSLLTEVETPTRSEWECRCSDSSDPLVIAANIIGILHLILWITDRLFFKC 50
gi|229535995_A/South_Carolina/ MSLLTEVETPTRSEWECRCSDSSDPLVIAANIIGILHLILWITDRLFFKC 50
gi|229536119_A/Michigan/02/200 MSLLTEVETPTRSEWECRCSDSSDPLVIAANIIGILHLILWITDRLFFKC 50
gi|229536047_A/Arizona/02/2009 MSLLTEVETPTRSEWECRCSDSSDPLVIAANIIGILHLILWITDRLFFKC 50
gi|229783401_A/New_York/1682/2 MSLLTEVETPTRSEWECRCSDSSDPLVIAANIIGILHLILWITDRLFFKC 50
gi|229892718_A/Mexico/InDRE411 MSLLTEVETPTRSEWECRCSDSSDPLVIAANIIGILHLILWITDRLFFKC 50
gi|229892713_A/Canada-NS/RV153 MSLLTEVETPTRSEWECRCSDSSDPLVIAANIIGILHLILWITDRLFFKC 50
gi|237511785_A/Mexico/4603/200 MSLLTEVETPTRSEWECRCSDSSDPLVIAANIIGILHLILWITDRLFFKC 50
gi|229536073_A/Texas/07/2009 MSLLTEVETPTRSEWECRCSDSSDPLVIAANIIGILHLILWITDRLFFKC 50
gi|237511788_A/Mexico/4108/200 MSLLTEVETPTRSEWECRCSDSSDPLVIAANIIGILHLILWITDRLFFKC 50
gi|228481040_A/Auckland/2/2009 MSLLTEVETPTRSEWECRCSDSSDPLVIAANIIGILHLILWITDRLFFKC 50
gi|229396384_A/New_York/18/200 MSLLTEVETPTRSEWECRCSDSSDPLVIAANIIGILHLILWITDRLFFKC 50
gi|229396430_A/New_York/10/200 MSLLTEVETPTRSEWECRCSDSSDPLVIAANIIGILHLILWITDRLFFKC 50
gi|229484040_A/Canada-ON/RV152 MSLLTEVETPTRSEWECRCSDSSDPLVIAANIIGILHLILWITDRLFFKC 50
gi|229462711_A/Pais_Vasco/GP20 MSLLTEVETPTRSEWECRCSDSSDPLVIAANIIGILHLILWITDRLFFKC 50
gi|229535814_A/Texas/09/2009 MSLLTEVETPTRSEWECRCSDSSDPLVIAANIIGILHLILWITDRLFFKC 50
gi|229535795_A/New_York/22/200 MSLLTEVETPTRSEWECRCSDSSDPLVIAANIIGILHLILWITDRLFFKC 50
gi|229536086_A/Indiana/09/2009 MSLLTEVETPTRSEWECRCSDSSDPLVIAANIIGILHLILWITDRLFFKC 50
gi|229536020_A/Arizona/01/2009 MSLLTEVETPTRSEWECRCSDSSDPLVIAANIIGILHLILWITDRLFFKC 50
gi|229783380_A/New_York/1669/2 MSLLTEVETPTRSEWECRCSDSSDPLVIAANIIGILHLILWITDRLFFKC 50
gi|229892715_A/Canada-ON/RV152 MSLLTEVETPTRSEWECRCSDSSDPLVIAANIIGILHLILWITDRLFFKC 50
gi|229892721_A/Canada-AB/RV153 MSLLTEVETPTRSEWECRCSDSSDPLVIAANIIGILHLILWITDRLFFKC 50
gi|237511761_A/Mexico/4115/200 MSLLTEVETPTRSEWECRCSDSSDPLVIAANIIGILHLILWITDRLFFKC 50
gi|237624333_A/swine/Alberta/O MSLLTEVETPTRSEWECRCSDSSDPLVIAANIIGILHLILWITDRLFFKC 50
gi|237511767_A/Mexico/4604/200 MSLLTEVETPTRSEWECRCSDSSDPLVIAANIIGILHLILWITDRLFFKC 50
gi|229892727_A/Canada-ON/RV152 MSLLTEVETPTRSEWECRCSDSSDPLVIAANIIGILHLILWITDRLFFKC 50
gi|229783371_A/Korea/01/2009 MSLLTEVETPTRSEWECRCSDSSDPLVIAANIIGILHLILWITDRLFFKC 50
gi|229598892_A/Texas/15/2009 MSLLTEVETPTRSEWECRCSDSSDPLVIAANIIGILHLILWITDRLFFKC 50
gi|229535832_A/California/14/2 MSLLTEVETPTRSEWECRCSDSSDPLVIAANIIGILHLILWITDRLFFKC 50
gi|229536036_A/Minnesota/02/20 MSLLTEVETPTRSEWECRCSDSSDPLVIAANIIGILHLILWITDRLFFKC 50
gi|229535982_A/Texas/08/2009 MSLLTEVETPTRSEWECRCSDSSDPLVIAANIIGILHLILWITDRLFFKC 50
gi|229462723_A/Castilla-La_Man MSLLTEVETPTRSEWECRCSDSSDPLVIAANIIGILHLILWITDRLFFKC 50
gi|229484034_A/Canada-NS/RV153 MSLLTEVETPTRSEWECRCSDSSDPLVIAANIIGILHLILWITDRLFFKC 50
gi|229396360_A/New_York/06/200 MSLLTEVETPTRSEWECRCSDSSDPLVIAANIIGILHLILWITDRLFFKC 50
gi|229396446_A/New_York/15/200 MSLLTEVETPTRSEWECRCSDSSDPLVIAANIIGILHLILWITDRLFFKC 50
gi|228481037_A/Auckland/3/2009 MSLLTEVETPTRSEWECRCSDSSDPLVIAANIIGILHLILWITDRLFFKC 50
gi|229536062_A/New_York/20/200 MSLLTEVETPTRSEWECRCSDSSDPLVIAANIIGILHLILWITDRLFFKC 50
gi|229396497_A/Ohio/07/2009 MSLLTEVETPTRSEWECRCSDSSDPLVIAANIIGILHLILWITDRLFFKC 50
gi|227977153_A/California/08/2 MSLLTEVETPTRSEWECRCSDSSDPLVIAANIIGILHLILWITDRLFFKC 50
gi|227831781_A/California/06/2 MSLLTEVETPTRSEWECRCSDSSDPLVIAANIIGILHLILWITDRLFFKC 50
gi|227977165_A/California/07/2 MSLLTEVETPTRSEWECRCSDSSDPLVIAANIIGILHLILWITDRLFFKC 50
gi|227831804_A/California/09/2 MSLLTEVETPTRSEWECRCSDSSDPLVIAANIIGILHLILWITDRLFFKC 50
gi|229299526_A/Texas/04/2009 MSLLTEVETPTRSEWECRCSDSSDPLVIAANIIGILHLILWITDRLFFKC 50
gi|227831795_A/Texas/05/2009 --LLTEVETPTRSEWECRCSDSSDPLVIAANIIGILHLILWITDRLFFKC 48
gi|237511779_A/Mexico/4486/200 ---LTEVETPTRSEWECRCSDSSDPLVIAANIIGILHLILWITDRLFFKC 47
gi|227977102_A/California/10/2 ---LTEVETPTRSEWECRCSDSSDPLVIAANIIGILHLILWITDRLFFKC 47
gi|237511782_A/Mexico/4482/200 ----TEVETPTRSEWECRCSDSSDPLVIAANIIGILHLILWITDRLFFKC 46
gi|227809837_A/California/04/2 ----TEVETPTRSEWECRCSDSSDPLVIAANIIGILHLILWITDRLFFKC 46
gi|227831822_A/Texas/04/2009 ----TEVETPTRSEWECRCSDSSDPLVIAANIIGILHLILWITDRLFFKC 46
gi|227831829_A/Texas/04/2009 ----TEVETPTRSEWECRCSDSSDPLVIAANIIGILHLILWITDRLFFKC 46
gi|227831764_A/California/05/2 MSPLTEVETPTRSEWECRCSDSSDPLVIAANIIGILHLILWITDRLFFKC 50
gi|229609551_A/Stockholm/28/20 --------TPTRSEWECRCSDSSDPLVIAANIIGILHLILWITDRLFFKC 42
******************************************
gi|229892724_A/Canada-NS/RV153 IYRRFKYGLKRGPSTEGVPESMREEYQQEQQSAVDVDDGHFVNIELE 97
gi|229368682_A/Denmark/513/200 IYRRFKYGLKRGPSTEGVPESMREEYQQEQQSAVDVDDGHFVNIE-- 95
gi|229299506_A/Texas/05/2009 IYRRFKYGLKRGPSTEGVPESMREEYQQEQQSAVDVDDGHFVNIELE 97
gi|227977141_A/California/07/2 IYRRFKYGLKRGPSTEGVPESMREEYQQEQQSAVDVDDGHFVNIELE 97
gi|227977109_A/California/04/2 IYRRFKYGLKRGPSTEGVPESMREEYQQEQQSAVDVDDGHFVNIELE 97
gi|227977121_A/California/08/2 IYRRFKYGLKRGPSTEGVPESMREEYQQEQQSAVDVDDGHFVNIELE 97
gi|229396490_A/Ohio/07/2009 IYRRFKYGLKRGPSTEGVPESMREEYQQEQQSAVDVDDGHFVNIELE 97
gi|229396474_A/New_York/19/200 IYRRFKYGLKRGPSTEGVPESMREEYQQEQQSAVDVDDGHFVNIELE 97
gi|229396458_A/Texas/06/2009 IYRRFKYGLKRGPSTEGVPESMREEYQQEQQSAVDVDDGHFVNIELE 97
gi|229396370_A/New_York/11/200 IYRRFKYGLKRGPSTEGVPESMREEYQQEQQSAVDVDDGHFVNIELE 97
gi|229484037_A/Mexico/InDRE448 IYRRFKYGLKRGPSTEGVPESMREEYQQEQQSAVDVDDGHFVNIELE 97
gi|229462699_A/Valencia/GP4/20 IYRRFKYGLKRGPSTEGVPESMREEYQQEQQSAVDVDDGHFVNIELE 97
gi|229462687_A/Castilla-La_Man IYRRFKYGLKRGPSTEGVPESMREEYQQEQQSAVDVDDGHFVNIELE 97
gi|229535995_A/South_Carolina/ IYRRFKYGLKRGPSTEGVPESMREEYQQEQQSAVDVDDGHFVNIELE 97
gi|229536119_A/Michigan/02/200 IYRRFKYGLKRGPSTEGVPESMREEYQQEQQSAVDVDDGHFVNIELE 97
gi|229536047_A/Arizona/02/2009 IYRRFKYGLKRGPSTEGVPESMREEYQQEQQSAVDVDDGHFVNIELE 97
gi|229783401_A/New_York/1682/2 IYRRFKYGLKRGPSTEGVPESMREEYQQEQQSAVDVDDGHFVNIELE 97
gi|229892718_A/Mexico/InDRE411 IYRRFKYGLKRGPSTEGVPESMREEYQQEQQSAVDVDDGHFVNIELE 97
gi|229892713_A/Canada-NS/RV153 IYRRFKYGLKRGPSTEGVPESMREEYQQEQQSAVDVDDGHFVNIELE 97
gi|237511785_A/Mexico/4603/200 IYRRFKYGLKRGPSTEGVPESMREEYQQEQQSAVDVDDGHFVNIELE 97
gi|229536073_A/Texas/07/2009 IYRRFKYGLKRGPSMEGVPESMREEYQQEQQSAVDVDDGHFVNIELE 97
gi|237511788_A/Mexico/4108/200 IYRRFKYGLKRGPSTEGVPESMREEYQQEQQNAVDVDDGHFVNIELE 97
gi|228481040_A/Auckland/2/2009 IYRRFKYGLKRGPSTEGVPESMREEYQQEQQSAVDVDDGHFVNIELE 97
gi|229396384_A/New_York/18/200 IYRRFKYGLKRGPSTEGVPESMREEYQQEQQSAVDVDDGHFVNIELE 97
gi|229396430_A/New_York/10/200 IYRRFKYGLKRGPSTEGVPESMREEYQQEQQSAVDVDDGHFVNIELE 97
gi|229484040_A/Canada-ON/RV152 IYRRFKYGLKRGPSTEGVPESMREEYQQEQQSAVDVDDGHFVNIELE 97
gi|229462711_A/Pais_Vasco/GP20 IYRRFKYGLKRGPSTEGVPESMREEYQQEQQSAVDVDDGHFVNIELE 97
gi|229535814_A/Texas/09/2009 IYRRFKYGLKRGPSTEGVPESMREEYQQEQQSAVDVDDGHFVNIELE 97
gi|229535795_A/New_York/22/200 IYRRFKYGLKRGPSTEGVPESMREEYQQEQQSAVDVDDGHFVNIELE 97
gi|229536086_A/Indiana/09/2009 IYRRFKYGLKRGPSTEGVPESMREEYQQEQQSAVDVDDGHFVNIELE 97
gi|229536020_A/Arizona/01/2009 IYRRFKYGLKRGPSTEGVPESMREEYQQEQQSAVDVDDGHFVNIELE 97
gi|229783380_A/New_York/1669/2 IYRRFKYGLKRGPSTEGVPESMREEYQQEQQSAVDVDDGHFVNIELE 97
gi|229892715_A/Canada-ON/RV152 IYRRFKYGLKRGPSTEGVPESMREEYQQEQQSAVDVDDGHFVNIELE 97
gi|229892721_A/Canada-AB/RV153 IYRRFKYGLKRGPSTEGVPESMREEYQQEQQSAVDVDDGHFVNIELE 97
gi|237511761_A/Mexico/4115/200 IYRRFKYGLKRGPSTEGVPESMREEYQQEQQSAVDVDDGHFVNIELE 97
gi|237624333_A/swine/Alberta/O IYRRFKYGLKRGPSTEGVPESMREEYQQEQQSAVDVDDGHFVNIELE 97
gi|237511767_A/Mexico/4604/200 IYRRFKYGLKRGPSTEGVPESMREEYQQEQQSAVDVDDGHFVNIELE 97
gi|229892727_A/Canada-ON/RV152 IYRRFKYGLKRGPSTEGVPESMREEYQQEQQSAVDVDDGHFVNIELE 97
gi|229783371_A/Korea/01/2009 IYRRFKYGLKRGPSTEGVPESMREEYQQEQQSAVDVDDGHFVNIELE 97
gi|229598892_A/Texas/15/2009 IYRRFKYGLKRGPSTEGVPESMREEYQQEQQSAVDVDDGHFVNIELE 97
gi|229535832_A/California/14/2 IYRRFKYGLKRGPSTEGVPESMREEYQQEQQSAVDVDDGHFVNIELE 97
gi|229536036_A/Minnesota/02/20 IYRRFKYGLKRGPSTEGVPESMREEYQQEQQSAVDVDDGHFVNIELE 97
gi|229535982_A/Texas/08/2009 IYRRFKYGLKRGPSTEGVPESMREEYQQEQQSAVDVDDGHFVNIELE 97
gi|229462723_A/Castilla-La_Man IYRRFKYGLKRGPSTEGVPESMREEYQQEQQSAVDVDDGHFVNIELE 97
gi|229484034_A/Canada-NS/RV153 IYRRFKYGLKRGPSTEGVPESMREEYQQEQQSAVDVDDGHFVNIELE 97
gi|229396360_A/New_York/06/200 IYRRFKYGLKRGPSTEGVPESMREEYQQEQQSAVDVDDGHFVNIELE 97
gi|229396446_A/New_York/15/200 IYRRFKYGLKRGPSTEGVPESMREEYQQEQQSAVDVDDGHFVNIELE 97
gi|228481037_A/Auckland/3/2009 IYRRFKYGLKRGPSTEGVPESMREEYQQEQQSAVDVDDGHFVNIELE 97
gi|229536062_A/New_York/20/200 IYRRFKYGLKRGPSTEGVPESMREEYQQEQQSAVDVDDGHFVNIELE 97
gi|229396497_A/Ohio/07/2009 IYRRFKYGLKRGPSTEGVPESMREEYQQEQQSAVDVDDGHFVNIELE 97
gi|227977153_A/California/08/2 IYRRFKYGLKRGPSTEGVPESMREEYQQEQQSAVDVDDGHFVNIELE 97
gi|227831781_A/California/06/2 IYRRFKYGLKRGPSTEGVPESMREEYQQEQQSAVDVDDGHFVNIELE 97
gi|227977165_A/California/07/2 IYRRFKYGLKRGPSTEGVPESMREEYQQEQQSAVDVDDGHFVNIELE 97
gi|227831804_A/California/09/2 IYRRFKYGLKRGPSTEGVPESMREEYQQEQQSAVDVDDGHFVNIELE 97
gi|229299526_A/Texas/04/2009 IYRRFKYGLKRGPSTEGVPESMREEYQQEQQSAVDVDDGHFVNIELE 97
gi|227831795_A/Texas/05/2009 IYRRFKYGLKRGPSTEGVPESMREEYQQEQQSAVDVDDGHFVNIELE 95
gi|237511779_A/Mexico/4486/200 IYRRFKYGLKRGPSTEGVPESMREEYQQEQQSAVDVDDGHFVNIELE 94
gi|227977102_A/California/10/2 IYRRFKYGLKRGPSTEGVPESMREEYQQEQQSAVDVDDGHFVNIELE 94
gi|237511782_A/Mexico/4482/200 IYRRFKYGLKRGPSTEGVPESMREEYQQEQQSAVDVDDGHFVNIELE 93
gi|227809837_A/California/04/2 IYRRFKYGLKRGPSTEGVPESMREEYQQEQQSAVDVDDGHFVNIELE 93
gi|227831822_A/Texas/04/2009 IYRRFKYGLKRGPSTEGVPESMREEYQQEQQSAVDVDDGHFVNIELE 93
gi|227831829_A/Texas/04/2009 IYRRFKYGLKRGPSTEGVPESMREEYQQEQQSAVDVDDGHFVNIELE 93
gi|227831764_A/California/05/2 IYRRFKYGLKRGPSTEGVPESMREEYQQEQQSAVDVDDGHFVNIELE 97
gi|229609551_A/Stockholm/28/20 IHRRFKYGLKRGPSTEGVPESMREEYQQEQQSAVDVDDGHFVNIELE 89
*:************ ****************.*************