User:Michael Strong/H1N1/NP/MSA
H1N1 Swine Flu Multiple Sequence Alignment of NP Protein, 67 sequencesH1N1 Swine Flu Multiple Sequence Alignment of NP Protein, 67 sequences
|
| Protein | Polymorphism | Strain with Polymorphism | Number of Strains with Polymorphism | |
| NP | G22D | 229598884_A/Texas/15/2009 | 1 | |
| NP | V35A | 237624329_A/swine/Alberta/O | 1 | |
| NP | S90N | 229536012_A/Arizona/01/2009 | 1 | |
| NP | V106I | 229892748_A/Canada-ON/RV152 | 28 | |
| NP | Q128L | 227977162_A/California/07/2 | 1 | |
| NP | L139I | 229783384_A/New_York/1669/2 | 2 | |
| NP | E198K | 237624329_A/swine/Alberta/O | 1 | |
| NP | N208D | 237624329_A/swine/Alberta/O | 1 | |
| NP | V223I | 229536102_A/Nebraska/02/200 | 2 | |
| NP | M228T | 237624329_A/swine/Alberta/O | 1 | |
| NP | A257T | 229396492_A/Ohio/07/2009 | 1 | |
| NP | V349I | 229536131_A/Colorado/03/200 | 2 | |
| NP | V358M | 229598873_A/Ohio/07/2009 | 1 | |
| NP | V369I | 229536077_A/Indiana/09/2009 | 1 | |
| NP | T379I | 229536102_A/Nebraska/02/200 | 18 | |
| NP | T379V | 229892752_A/Canada-NS/RV153 | 1 | |
| NP | D381N | 229396423_A/California/08/2 | 1 | |
| NP | D381Y | 237624329_A/swine/Alberta/O | 1 | |
| NP | T402A | 237511901_A/Mexico/4516/200 | 1 | |
| NP | S456N | 229536077_A/Indiana/09/2009 | 1 |
gi|229536005_A/Kansas/03/2009 ------MASQGTKRSYEQMETGGERQDATEIRASVGRMIGGIGRFYIQMC 44
gi|229783384_A/New_York/1669/2 ------MASQGTKRSYEQMETGGERQDATEIRASVGRMIGGIGRFYIQMC 44
gi|229536077_A/Indiana/09/2009 ------MASQGTKRSYEQMETGGERQDATEIRASVGRMIGGIGRFYIQMC 44
gi|227831778_A/California/06/2 ------MASQGTKRSYEQMETGGERQDATEIRASVGRMIGGIGRFYIQMC 44
gi|227831761_A/California/05/2 ------MASQGTKRSYEQMETGGERQDATEIRASVGRMIGGIGRFYIQMC 44
gi|229462701_A/Valencia/GP4/20 ------MASQGTKRSYEQMETGGERQDATEIRASVGRMIGGIGRFYIQMC 44
gi|229462713_A/Pais_Vasco/GP20 ------MASQGTKRSYEQMETGGERQDATEIRASVGRMIGGIGRFYIQMC 44
gi|229462689_A/Castilla-La_Man ------MASQGTKRSYEQMETGGERQDATEIRASVGRMIGGIGRFYIQMC 44
gi|229536066_A/Texas/07/2009 ------MASQGTKRSYEQMETGGERQDATEIRASVGRMIGGIGRFYIQMC 44
gi|229536024_A/Minnesota/02/20 ------MASQGTKRSYEQMETGGERQDATEIRASVGRMIGGIGRFYIQMC 44
gi|229536038_A/Arizona/02/2009 ------MASQGTKRSYEQMETGGERQDATEIRASVGRMIGGIGRFYIQMC 44
gi|229783405_A/New_York/1682/2 ------MASQGTKRSYEQMETGGERQDATEIRASVGRMIGGIGRFYIQMC 44
gi|237511891_A/Mexico/4486/200 ------MASQGTKRSYEQMETGGERQDATEIRASVGRMIGGIGRFYIQMC 44
gi|237511915_A/Mexico/4108/200 ------MASQGTKRSYEQMETGGERQDATEIRASVGRMIGGIGRFYIQMC 44
gi|227977162_A/California/07/2 ------MASQGTKRSYEQMETGGERQDATEIRASVGRMIGGIGRFYIQMC 44
gi|229536012_A/Arizona/01/2009 ------MASQGTKRSYEQMETGGERQDATEIRASVGRMIGGIGRFYIQMC 44
gi|229598884_A/Texas/15/2009 ------MASQGTKRSYEQMETDGERQDATEIRASVGRMIGGIGRFYIQMC 44
gi|229299508_A/Texas/05/2009 ------MASQGTKRSYEQMETGGERQDATEIRASVGRMIGGIGRFYIQMC 44
gi|227831792_A/Texas/05/2009 ------MASQGTKRSYEQMETGGERQDATEIRASVGRMIGGIGRFYIQMC 44
gi|229299528_A/Texas/04/2009 ------MASQGTKRSYEQMETGGERQDATEIRASVGRMIGGIGRFYIQMC 44
gi|227831819_A/Texas/04/2009 ------MASQGTKRSYEQMETGGERQDATEIRASVGRMIGGIGRFYIQMC 44
gi|227977106_A/California/04/2 ------MASQGTKRSYEQMETGGERQDATEIRASVGRMIGGIGRFYIQMC 44
gi|227809832_A/California/04/2 ------MASQGTKRSYEQMETGGERQDATEIRASVGRMIGGIGRFYIQMC 44
gi|229396465_A/Texas/06/2009 ------MASQGTKRSYEQMETGGERQDATEIRASVGRMIGGIGRFYIQMC 44
gi|229462725_A/Castilla-La_Man ------MASQGTKRSYEQMETGGERQDATEIRASVGRMIGGIGRFYIQMC 44
gi|229535799_A/Texas/09/2009 ------MASQGTKRSYEQMETGGERQDATEIRASVGRMIGGIGRFYIQMC 44
gi|229535951_A/Texas/08/2009 ------MASQGTKRSYEQMETGGERQDATEIRASVGRMIGGIGRFYIQMC 44
gi|229535999_A/Kansas/02/2009 ------MASQGTKRSYEQMETGGERQDATEIRASVGRMIGGIGRFYIQMC 44
gi|237511917_A/Mexico/4115/200 ------MASQGTKRSYEQMETGGERQDATEIRASVGRMIGGIGRFYIQMC 44
gi|229536057_A/New_York/20/200 ------MASQGTKRSYEQMETGGERQDATEIRASVGRMIGGIGRFYIQMC 44
gi|229396355_A/New_York/12/200 ------MASQGTKRSYEQMETGGERQDATEIRASVGRMIGGIGRFYIQMC 44
gi|229536051_A/New_York/20/200 ------MASQGTKRSYEQMETGGERQDATEIRASVGRMIGGIGRFYIQMC 44
gi|229396481_A/New_York/19/200 ------MASQGTKRSYEQMETGGERQDATEIRASVGRMIGGIGRFYIQMC 44
gi|237511911_A/Mexico/4482/200 ------MASQGTKRSYEQMETGGERQDATEIRASVGRMIGGIGRFYIQMC 44
gi|237511913_A/Mexico/4603/200 ------MASQGTKRSYEQMETGGERQDATEIRASVGRMIGGIGRFYIQMC 44
gi|237511895_A/Mexico/4604/200 ------MASQGTKRSYEQMETGGERQDATEIRASVGRMIGGIGRFYIQMC 44
gi|229783369_A/Korea/01/2009 ------MASQGTKRSYEQMETGGERQDATEIRASVGRMIGGIGRFYIQMC 44
gi|229535818_A/California/14/2 ------MASQGTKRSYEQMETGGERQDATEIRASVGRMIGGIGRFYIQMC 44
gi|229535905_A/Massachusetts/0 ------MASQGTKRSYEQMETGGERQDATEIRASVGRMIGGIGRFYIQMC 44
gi|229536096_A/Massachusetts/0 ------MASQGTKRSYEQMETGGERQDATEIRASVGRMIGGIGRFYIQMC 44
gi|229536109_A/Michigan/02/200 ------MASQGTKRSYEQMETGGERQDATEIRASVGRMIGGIGRFYIQMC 44
gi|229536123_A/New_York/13/200 ------MASQGTKRSYEQMETGGERQDATEIRASVGRMIGGIGRFYIQMC 44
gi|229535786_A/New_York/22/200 ------MASQGTKRSYEQMETGGERQDATEIRASVGRMIGGIGRFYIQMC 44
gi|229396367_A/New_York/06/200 ------MASQGTKRSYEQMETGGERQDATEIRASVGRMIGGIGRFYIQMC 44
gi|229396437_A/New_York/10/200 ------MASQGTKRSYEQMETGGERQDATEIRASVGRMIGGIGRFYIQMC 44
gi|229396377_A/New_York/11/200 ------MASQGTKRSYEQMETGGERQDATEIRASVGRMIGGIGRFYIQMC 44
gi|229396453_A/New_York/15/200 ------MASQGTKRSYEQMETGGERQDATEIRASVGRMIGGIGRFYIQMC 44
gi|229396393_A/New_York/18/200 ------MASQGTKRSYEQMETGGERQDATEIRASVGRMIGGIGRFYIQMC 44
gi|229396417_A/New_York/23/200 ------MASQGTKRSYEQMETGGERQDATEIRASVGRMIGGIGRFYIQMC 44
gi|229396406_A/New_York/31/200 ------MASQGTKRSYEQMETGGERQDATEIRASVGRMIGGIGRFYIQMC 44
gi|229598873_A/Ohio/07/2009 ------MASQGTKRSYEQMETGGERQDATEIRASVGRMIGGIGRFYIQMC 44
gi|229396492_A/Ohio/07/2009 ------MASQGTKRSYEQMETGGERQDATEIRASVGRMIGGIGRFYIQMC 44
gi|237511901_A/Mexico/4516/200 ------MASQGTKRSYEQMETGGERQDATEIRASVGRMIGGIGRFYIQMC 44
gi|229892750_A/Canada-AB/RV153 MSDIEAMASQGTKRSYEQMETGGERQDATEIRASVGRMIGGIGRFYIQMC 50
gi|229892746_A/Canada-ON/RV152 MSDIEAMASQGTKRSYEQMETGGERQDATEIRASVGRMIGGIGRFYIQMC 50
gi|229892748_A/Canada-ON/RV152 MSDIEAMASQGTKRSYEQMETGGERQDATEIRASVGRMIGGIGRFYIQMC 50
gi|229484052_A/Canada-ON/RV152 MSDIEAMASQGTKRSYEQMETGGERQDATEIRASVGRMIGGIGRFYIQMC 50
gi|229892744_A/Mexico/InDRE411 MSDIEAMASQGTKRSYEQMETGGERQDATEIRASVGRMIGGIGRFYIQMC 50
gi|229484050_A/Mexico/InDRE448 MSDIEAMASQGTKRSYEQMETGGERQDATEIRASVGRMIGGIGRFYIQMC 50
gi|229396423_A/California/08/2 ------MASQGTKRSYEQMETGGERQDATEIRASVGRMIGGIGRFYIQMC 44
gi|229535987_A/South_Carolina/ ------MASQGTKRSYEQMETGGERQDATEIRASVGRMIGGIGRFYIQMC 44
gi|229536131_A/Colorado/03/200 ------MASQGTKRSYEQMETGGERQDATEIRASVGRMIGGIGRFYIQMC 44
gi|229892752_A/Canada-NS/RV153 MSDIEAMASQGTKRSYEQMETGGERQDATEIRASVGRMIGGIGRFYIQMC 50
gi|229536102_A/Nebraska/02/200 ------MASQGTKRSYEQMETGGERQDATEIRASVGRMIGGIGRFYIQMC 44
gi|229892742_A/Canada-NS/RV153 MSDIEAMASQGTKRSYEQMETGGERQDATEIRASVGRMIGGIGRFYIQMC 50
gi|229484048_A/Canada-NS/RV153 MSDIEAMASQGTKRSYEQMETGGERQDATEIRASVGRMIGGIGRFYIQMC 50
gi|237624329_A/swine/Alberta/O MSDIEAMASQGTKRSYEQMETGGERQDATEIRASAGRMIGGIGRFYIQMC 50
***************.************.***************
gi|229536005_A/Kansas/03/2009 TELKLSDYDGRLIQNSITIERMVLSAFDERRNKYLEEHPSAGKDPKKTGG 94
gi|229783384_A/New_York/1669/2 TELKLSDYDGRLIQNSITIERMVLSAFDERRNKYLEEHPSAGKDPKKTGG 94
gi|229536077_A/Indiana/09/2009 TELKLSDYDGRLIQNSITIERMVLSAFDERRNKYLEEHPSAGKDPKKTGG 94
gi|227831778_A/California/06/2 TELKLSDYDGRLIQNSITIERMVLSAFDERRNKYLEEHPSAGKDPKKTGG 94
gi|227831761_A/California/05/2 TELKLSDYDGRLIQNSITIERMVLSAFDERRNKYLEEHPSAGKDPKKTGG 94
gi|229462701_A/Valencia/GP4/20 TELKLSDYDGRLIQNSITIERMVLSAFDERRNKYLEEHPSAGKDPKKTGG 94
gi|229462713_A/Pais_Vasco/GP20 TELKLSDYDGRLIQNSITIERMVLSAFDERRNKYLEEHPSAGKDPKKTGG 94
gi|229462689_A/Castilla-La_Man TELKLSDYDGRLIQNSITIERMVLSAFDERRNKYLEEHPSAGKDPKKTGG 94
gi|229536066_A/Texas/07/2009 TELKLSDYDGRLIQNSITIERMVLSAFDERRNKYLEEHPSAGKDPKKTGG 94
gi|229536024_A/Minnesota/02/20 TELKLSDYDGRLIQNSITIERMVLSAFDERRNKYLEEHPSAGKDPKKTGG 94
gi|229536038_A/Arizona/02/2009 TELKLSDYDGRLIQNSITIERMVLSAFDERRNKYLEEHPSAGKDPKKTGG 94
gi|229783405_A/New_York/1682/2 TELKLSDYDGRLIQNSITIERMVLSAFDERRNKYLEEHPSAGKDPKKTGG 94
gi|237511891_A/Mexico/4486/200 TELKLSDYDGRLIQNSITIERMVLSAFDERRNKYLEEHPSAGKDPKKTGG 94
gi|237511915_A/Mexico/4108/200 TELKLSDYDGRLIQNSITIERMVLSAFDERRNKYLEEHPSAGKDPKKTGG 94
gi|227977162_A/California/07/2 TELKLSDYDGRLIQNSITIERMVLSAFDERRNKYLEEHPSAGKDPKKTGG 94
gi|229536012_A/Arizona/01/2009 TELKLSDYDGRLIQNSITIERMVLSAFDERRNKYLEEHPNAGKDPKKTGG 94
gi|229598884_A/Texas/15/2009 TELKLSDYDGRLIQNSITIERMVLSAFDERRNKYLEEHPSAGKDPKKTGG 94
gi|229299508_A/Texas/05/2009 TELKLSDYDGRLIQNSITIERMVLSAFDERRNKYLEEHPSAGKDPKKTGG 94
gi|227831792_A/Texas/05/2009 TELKLSDYDGRLIQNSITIERMVLSAFDERRNKYLEEHPSAGKDPKKTGG 94
gi|229299528_A/Texas/04/2009 TELKLSDYDGRLIQNSITIERMVLSAFDERRNKYLEEHPSAGKDPKKTGG 94
gi|227831819_A/Texas/04/2009 TELKLSDYDGRLIQNSITIERMVLSAFDERRNKYLEEHPSAGKDPKKTGG 94
gi|227977106_A/California/04/2 TELKLSDYDGRLIQNSITIERMVLSAFDERRNKYLEEHPSAGKDPKKTGG 94
gi|227809832_A/California/04/2 TELKLSDYDGRLIQNSITIERMVLSAFDERRNKYLEEHPSAGKDPKKTGG 94
gi|229396465_A/Texas/06/2009 TELKLSDYDGRLIQNSITIERMVLSAFDERRNKYLEEHPSAGKDPKKTGG 94
gi|229462725_A/Castilla-La_Man TELKLSDYDGRLIQNSITIERMVLSAFDERRNKYLEEHPSAGKDPKKTGG 94
gi|229535799_A/Texas/09/2009 TELKLSDYDGRLIQNSITIERMVLSAFDERRNKYLEEHPSAGKDPKKTGG 94
gi|229535951_A/Texas/08/2009 TELKLSDYDGRLIQNSITIERMVLSAFDERRNKYLEEHPSAGKDPKKTGG 94
gi|229535999_A/Kansas/02/2009 TELKLSDYDGRLIQNSITIERMVLSAFDERRNKYLEEHPSAGKDPKKTGG 94
gi|237511917_A/Mexico/4115/200 TELKLSDYDGRLIQNSITIERMVLSAFDERRNKYLEEHPSAGKDPKKTGG 94
gi|229536057_A/New_York/20/200 TELKLSDYDGRLIQNSITIERMVLSAFDERRNKYLEEHPSAGKDPKKTGG 94
gi|229396355_A/New_York/12/200 TELKLSDYDGRLIQNSITIERMVLSAFDERRNKYLEEHPSAGKDPKKTGG 94
gi|229536051_A/New_York/20/200 TELKLSDYDGRLIQNSITIERMVLSAFDERRNKYLEEHPSAGKDPKKTGG 94
gi|229396481_A/New_York/19/200 TELKLSDYDGRLIQNSITIERMVLSAFDERRNKYLEEHPSAGKDPKKTGG 94
gi|237511911_A/Mexico/4482/200 TELKLSDYDGRLIQNSITIERMVLSAFDERRNKYLEEHPSAGKDPKKTGG 94
gi|237511913_A/Mexico/4603/200 TELKLSDYDGRLIQNSITIERMVLSAFDERRNKYLEEHPSAGKDPKKTGG 94
gi|237511895_A/Mexico/4604/200 TELKLSDYDGRLIQNSITIERMVLSAFDERRNKYLEEHPSAGKDPKKTGG 94
gi|229783369_A/Korea/01/2009 TELKLSDYDGRLIQNSITIERMVLSAFDERRNKYLEEHPSAGKDPKKTGG 94
gi|229535818_A/California/14/2 TELKLSDYDGRLIQNSITIERMVLSAFDERRNKYLEEHPSAGKDPKKTGG 94
gi|229535905_A/Massachusetts/0 TELKLSDYDGRLIQNSITIERMVLSAFDERRNKYLEEHPSAGKDPKKTGG 94
gi|229536096_A/Massachusetts/0 TELKLSDYDGRLIQNSITIERMVLSAFDERRNKYLEEHPSAGKDPKKTGG 94
gi|229536109_A/Michigan/02/200 TELKLSDYDGRLIQNSITIERMVLSAFDERRNKYLEEHPSAGKDPKKTGG 94
gi|229536123_A/New_York/13/200 TELKLSDYDGRLIQNSITIERMVLSAFDERRNKYLEEHPSAGKDPKKTGG 94
gi|229535786_A/New_York/22/200 TELKLSDYDGRLIQNSITIERMVLSAFDERRNKYLEEHPSAGKDPKKTGG 94
gi|229396367_A/New_York/06/200 TELKLSDYDGRLIQNSITIERMVLSAFDERRNKYLEEHPSAGKDPKKTGG 94
gi|229396437_A/New_York/10/200 TELKLSDYDGRLIQNSITIERMVLSAFDERRNKYLEEHPSAGKDPKKTGG 94
gi|229396377_A/New_York/11/200 TELKLSDYDGRLIQNSITIERMVLSAFDERRNKYLEEHPSAGKDPKKTGG 94
gi|229396453_A/New_York/15/200 TELKLSDYDGRLIQNSITIERMVLSAFDERRNKYLEEHPSAGKDPKKTGG 94
gi|229396393_A/New_York/18/200 TELKLSDYDGRLIQNSITIERMVLSAFDERRNKYLEEHPSAGKDPKKTGG 94
gi|229396417_A/New_York/23/200 TELKLSDYDGRLIQNSITIERMVLSAFDERRNKYLEEHPSAGKDPKKTGG 94
gi|229396406_A/New_York/31/200 TELKLSDYDGRLIQNSITIERMVLSAFDERRNKYLEEHPSAGKDPKKTGG 94
gi|229598873_A/Ohio/07/2009 TELKLSDYDGRLIQNSITIERMVLSAFDERRNKYLEEHPSAGKDPKKTGG 94
gi|229396492_A/Ohio/07/2009 TELKLSDYDGRLIQNSITIERMVLSAFDERRNKYLEEHPSAGKDPKKTGG 94
gi|237511901_A/Mexico/4516/200 TELKLSDYDGRLIQNSITIERMVLSAFDERRNKYLEEHPSAGKDPKKTGG 94
gi|229892750_A/Canada-AB/RV153 TELKLSDYDGRLIQNSITIERMVLSAFDERRNKYLEEHPSAGKDPKKTGG 100
gi|229892746_A/Canada-ON/RV152 TELKLSDYDGRLIQNSITIERMVLSAFDERRNKYLEEHPSAGKDPKKTGG 100
gi|229892748_A/Canada-ON/RV152 TELKLSDYDGRLIQNSITIERMVLSAFDERRNKYLEEHPSAGKDPKKTGG 100
gi|229484052_A/Canada-ON/RV152 TELKLSDYDGRLIQNSITIERMVLSAFDERRNKYLEEHPSAGKDPKKTGG 100
gi|229892744_A/Mexico/InDRE411 TELKLSDYDGRLIQNSITIERMVLSAFDERRNKYLEEHPSAGKDPKKTGG 100
gi|229484050_A/Mexico/InDRE448 TELKLSDYDGRLIQNSITIERMVLSAFDERRNKYLEEHPSAGKDPKKTGG 100
gi|229396423_A/California/08/2 TELKLSDYDGRLIQNSITIERMVLSAFDERRNKYLEEHPSAGKDPKKTGG 94
gi|229535987_A/South_Carolina/ TELKLSDYDGRLIQNSITIERMVLSAFDERRNKYLEEHPSAGKDPKKTGG 94
gi|229536131_A/Colorado/03/200 TELKLSDYDGRLIQNSITIERMVLSAFDERRNKYLEEHPSAGKDPKKTGG 94
gi|229892752_A/Canada-NS/RV153 TELKLSDYDGRLIQNSITIERMVLSAFDERRNKYLEEHPSAGKDPKKTGG 100
gi|229536102_A/Nebraska/02/200 TELKLSDYDGRLIQNSITIERMVLSAFDERRNKYLEEHPSAGKDPKKTGG 94
gi|229892742_A/Canada-NS/RV153 TELKLSDYDGRLIQNSITIERMVLSAFDERRNKYLEEHPSAGKDPKKTGG 100
gi|229484048_A/Canada-NS/RV153 TELKLSDYDGRLIQNSITIERMVLSAFDERRNKYLEEHPSAGKDPKKTGG 100
gi|237624329_A/swine/Alberta/O TELKLSDYDGRLIQNSITIERMVLSAFDERRNKYLEEHPSAGKDPKKTGG 100
***************************************.**********
gi|229536005_A/Kansas/03/2009 PIYRRVDGKWMRELILYDKEEIRRVWRQANNGEDATAGITHIMIWHSNLN 144
gi|229783384_A/New_York/1669/2 PIYRRVDGKWMRELILYDKEEIRRVWRQANNGEDATAGITHIMIWHSNLN 144
gi|229536077_A/Indiana/09/2009 PIYRRVDGKWMRELILYDKEEIRRVWRQANNGEDATAGLTHIMIWHSNLN 144
gi|227831778_A/California/06/2 PIYRRVDGKWMRELILYDKEEIRRVWRQANNGEDATAGLTHIMIWHSNLN 144
gi|227831761_A/California/05/2 PIYRRVDGKWMRELILYDKEEIRRVWRQANNGEDATAGLTHIMIWHSNLN 144
gi|229462701_A/Valencia/GP4/20 PIYRRVDGKWMRELILYDKEEIRRVWRQANNGEDATAGLTHIMIWHSNLN 144
gi|229462713_A/Pais_Vasco/GP20 PIYRRVDGKWMRELILYDKEEIRRVWRQANNGEDATAGLTHIMIWHSNLN 144
gi|229462689_A/Castilla-La_Man PIYRRVDGKWMRELILYDKEEIRRVWRQANNGEDATAGLTHIMIWHSNLN 144
gi|229536066_A/Texas/07/2009 PIYRRVDGKWMRELILYDKEEIRRVWRQANNGEDATAGLTHIMIWHSNLN 144
gi|229536024_A/Minnesota/02/20 PIYRRVDGKWMRELILYDKEEIRRVWRQANNGEDATAGLTHIMIWHSNLN 144
gi|229536038_A/Arizona/02/2009 PIYRRVDGKWMRELILYDKEEIRRVWRQANNGEDATAGLTHIMIWHSNLN 144
gi|229783405_A/New_York/1682/2 PIYRRVDGKWMRELILYDKEEIRRVWRQANNGEDATAGLTHIMIWHSNLN 144
gi|237511891_A/Mexico/4486/200 PIYRRVDGKWMRELILYDKEEIRRVWRQANNGEDATAGLTHIMIWHSNLN 144
gi|237511915_A/Mexico/4108/200 PIYRRVDGKWMRELILYDKEEIRRVWRQANNGEDATAGLTHIMIWHSNLN 144
gi|227977162_A/California/07/2 PIYRRVDGKWMRELILYDKXEIRRVWRLANNGEDATAGLTHIMIWHSNLN 144
gi|229536012_A/Arizona/01/2009 PIYRRVDGKWMRELILYDKEEIRRVWRQANNGEDATAGLTHIMIWHSNLN 144
gi|229598884_A/Texas/15/2009 PIYRRVDGKWMRELILYDKEEIRRVWRQANNGEDATAGLTHIMIWHSNLN 144
gi|229299508_A/Texas/05/2009 PIYRRVDGKWMRELILYDKEEIRRVWRQANNGEDATAGLTHIMIWHSNLN 144
gi|227831792_A/Texas/05/2009 PIYRRVDGKWMRELILYDKEEIRRVWRQANNGEDATAGLTHIMIWHSNLN 144
gi|229299528_A/Texas/04/2009 PIYRRVDGKWMRELILYDKEEIRRVWRQANNGEDATAGLTHIMIWHSNLN 144
gi|227831819_A/Texas/04/2009 PIYRRVDGKWMRELILYDKEEIRRVWRQANNGEDATAGLTHIMIWHSNLN 144
gi|227977106_A/California/04/2 PIYRRVDGKWMRELILYDKEEIRRVWRQANNGEDATAGLTHIMIWHSNLN 144
gi|227809832_A/California/04/2 PIYRRVDGKWMRELILYDKEEIRRVWRQANNGEDATAGLTHIMIWHSNLN 144
gi|229396465_A/Texas/06/2009 PIYRRVDGKWMRELILYDKEEIRRVWRQANNGEDATAGLTHIMIWHSNLN 144
gi|229462725_A/Castilla-La_Man PIYRRVDGKWMRELILYDKEEIRRVWRQANNGEDATAGLTHIMIWHSNLN 144
gi|229535799_A/Texas/09/2009 PIYRRVDGKWMRELILYDKEEIRRVWRQANNGEDATAGLTHIMIWHSNLN 144
gi|229535951_A/Texas/08/2009 PIYRRVDGKWMRELILYDKEEIRRVWRQANNGEDATAGLTHIMIWHSNLN 144
gi|229535999_A/Kansas/02/2009 PIYRRVDGKWMRELILYDKEEIRRVWRQANNGEDATAGLTHIMIWHSNLN 144
gi|237511917_A/Mexico/4115/200 PIYRRVDGKWMRELILYDKEEIRRVWRQANNGEDATAGLTHIMIWHSNLN 144
gi|229536057_A/New_York/20/200 PIYRRIDGKWMRELILYDKEEIRRVWRQANNGEDATAGLTHIMIWHSNLN 144
gi|229396355_A/New_York/12/200 PIYRRIDGKWMRELILYDKEEIRRVWRQANNGEDATAGLTHIMIWHSNLN 144
gi|229536051_A/New_York/20/200 PIYRRIDGKWMRELILYDKEEIRRVWRQANNGEDATAGLTHIMIWHSNLN 144
gi|229396481_A/New_York/19/200 PIYRRIDGKWMRELILYDKEEIRRVWRQANNGEDATAGLTHIMIWHSNLN 144
gi|237511911_A/Mexico/4482/200 PIYRRIDGKWMRELILYDKEEIRRVWRQANNGEDATAGLTHIMIWHSNLN 144
gi|237511913_A/Mexico/4603/200 PIYRRIDGKWMRELILYDKEEIRRVWRQANNGEDATAGLTHIMIWHSNLN 144
gi|237511895_A/Mexico/4604/200 PIYRRIDGKWMRELILYDKEEIRRVWRQANNGEDATAGLTHIMIWHSNLN 144
gi|229783369_A/Korea/01/2009 PIYRRIDGKWMRELILYDKEEIRRVWRQANNGEDATAGLTHIMIWHSNLN 144
gi|229535818_A/California/14/2 PIYRRIDGKWMRELILYDKEEIRRVWRQANNGEDATAGLTHIMIWHSNLN 144
gi|229535905_A/Massachusetts/0 PIYRRIDGKWMRELILYDKEEIRRVWRQANNGEDATAGLTHIMIWHSNLN 144
gi|229536096_A/Massachusetts/0 PIYRRIDGKWMRELILYDKEEIRRVWRQANNGEDATAGLTHIMIWHSNLN 144
gi|229536109_A/Michigan/02/200 PIYRRIDGKWMRELILYDKEEIRRVWRQANNGEDATAGLTHIMIWHSNLN 144
gi|229536123_A/New_York/13/200 PIYRRIDGKWMRELILYDKEEIRRVWRQANNGEDATAGLTHIMIWHSNLN 144
gi|229535786_A/New_York/22/200 PIYRRIDGKWMRELILYDKEEIRRVWRQANNGEDATAGLTHIMIWHSNLN 144
gi|229396367_A/New_York/06/200 PIYRRIDGKWMRELILYDKEEIRRVWRQANNGEDATAGLTHIMIWHSNLN 144
gi|229396437_A/New_York/10/200 PIYRRIDGKWMRELILYDKEEIRRVWRQANNGEDATAGLTHIMIWHSNLN 144
gi|229396377_A/New_York/11/200 PIYRRIDGKWMRELILYDKEEIRRVWRQANNGEDATAGLTHIMIWHSNLN 144
gi|229396453_A/New_York/15/200 PIYRRIDGKWMRELILYDKEEIRRVWRQANNGEDATAGLTHIMIWHSNLN 144
gi|229396393_A/New_York/18/200 PIYRRIDGKWMRELILYDKEEIRRVWRQANNGEDATAGLTHIMIWHSNLN 144
gi|229396417_A/New_York/23/200 PIYRRIDGKWMRELILYDKEEIRRVWRQANNGEDATAGLTHIMIWHSNLN 144
gi|229396406_A/New_York/31/200 PIYRRIDGKWMRELILYDKEEIRRVWRQANNGEDATAGLTHIMIWHSNLN 144
gi|229598873_A/Ohio/07/2009 PIYRRIDGKWMRELILYDKEEIRRVWRQANNGEDATAGLTHIMIWHSNLN 144
gi|229396492_A/Ohio/07/2009 PIYRRIDGKWMRELILYDKEEIRRVWRQANNGEDATAGLTHIMIWHSNLN 144
gi|237511901_A/Mexico/4516/200 PIYRRIDGKWMRELILYDKEEIRRVWRQANNGEDATAGLTHIMIWHSNLN 144
gi|229892750_A/Canada-AB/RV153 PIYRRIDGKWMRELILYDKEEIRRVWRQANNGEDATAGLTHIMIWHSNLN 150
gi|229892746_A/Canada-ON/RV152 PIYRRIDGKWMRELILYDKEEIRRVWRQANNGEDATAGLTHIMIWHSNLN 150
gi|229892748_A/Canada-ON/RV152 PIYRRIDGKWMRELILYDKEEIRRVWRQANNGEDATAGLTHIMIWHSNLN 150
gi|229484052_A/Canada-ON/RV152 PIYRRIDGKWMRELILYDKEEIRRVWRQANNGEDATAGLTHIMIWHSNLN 150
gi|229892744_A/Mexico/InDRE411 PIYRRVDGKWMRELILYDKEEIRRVWRQANNGEDATAGLTHIMIWHSNLN 150
gi|229484050_A/Mexico/InDRE448 PIYRRVDGKWMRELILYDKEEIRRVWRQANNGEDATAGLTHIMIWHSNLN 150
gi|229396423_A/California/08/2 PIYRRVDGKWMRELILYDKEEIRRVWRQANNGEDATAGLTHIMIWHSNLN 144
gi|229535987_A/South_Carolina/ PIYRRVDGKWMRELILYDKEEIRRVWRQANNGEDATAGLTHIMIWHSNLN 144
gi|229536131_A/Colorado/03/200 PIYRRVDGKWMRELILYDKEEIRRVWRQANNGEDATAGLTHIMIWHSNLN 144
gi|229892752_A/Canada-NS/RV153 PIYRRVDGKWMRELILYDKEEIRRVWRQANNGEDATAGLTHIMIWHSNLN 150
gi|229536102_A/Nebraska/02/200 PIYRRVDGKWMRELILYDKEEIRRVWRQANNGEDATAGLTHIMIWHSNLN 144
gi|229892742_A/Canada-NS/RV153 PIYRRVDGKWMRELILYDKEEIRRVWRQANNGEDATAGLTHIMIWHSNLN 150
gi|229484048_A/Canada-NS/RV153 PIYRRVDGKWMRELILYDKEEIRRVWRQANNGEDATAGLTHIMIWHSNLN 150
gi|237624329_A/swine/Alberta/O PIYRRVDGKWMRELILYDKEEIRRVWRQANNGEDATAGLTHIMIWHSNLN 150
*****:************* ******* **********:***********
gi|229536005_A/Kansas/03/2009 DATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTIAMELI 194
gi|229783384_A/New_York/1669/2 DATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTIAMELI 194
gi|229536077_A/Indiana/09/2009 DATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTIAMELI 194
gi|227831778_A/California/06/2 DATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTIAMELI 194
gi|227831761_A/California/05/2 DATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTIAMELI 194
gi|229462701_A/Valencia/GP4/20 DATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTIAMELI 194
gi|229462713_A/Pais_Vasco/GP20 DATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTIAMELI 194
gi|229462689_A/Castilla-La_Man DATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTIAMELI 194
gi|229536066_A/Texas/07/2009 DATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTIAMELI 194
gi|229536024_A/Minnesota/02/20 DATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTIAMELI 194
gi|229536038_A/Arizona/02/2009 DATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTIAMELI 194
gi|229783405_A/New_York/1682/2 DATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTIAMELI 194
gi|237511891_A/Mexico/4486/200 DATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTIAMELI 194
gi|237511915_A/Mexico/4108/200 DATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTIAMELI 194
gi|227977162_A/California/07/2 DATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTIAMELI 194
gi|229536012_A/Arizona/01/2009 DATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTIAMELI 194
gi|229598884_A/Texas/15/2009 DATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTIAMELI 194
gi|229299508_A/Texas/05/2009 DATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTIAMELI 194
gi|227831792_A/Texas/05/2009 DATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTIAMELI 194
gi|229299528_A/Texas/04/2009 DATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTIAMELI 194
gi|227831819_A/Texas/04/2009 DATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTIAMELI 194
gi|227977106_A/California/04/2 DATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTIAMELI 194
gi|227809832_A/California/04/2 DATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTIAMELI 194
gi|229396465_A/Texas/06/2009 DATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTIAMELI 194
gi|229462725_A/Castilla-La_Man DATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTIAMELI 194
gi|229535799_A/Texas/09/2009 DATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTIAMELI 194
gi|229535951_A/Texas/08/2009 DATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTIAMELI 194
gi|229535999_A/Kansas/02/2009 DATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTIAMELI 194
gi|237511917_A/Mexico/4115/200 DATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTIAMELI 194
gi|229536057_A/New_York/20/200 DATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTIAMELI 194
gi|229396355_A/New_York/12/200 DATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTIAMELI 194
gi|229536051_A/New_York/20/200 DATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTIAMELI 194
gi|229396481_A/New_York/19/200 DATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTIAMELI 194
gi|237511911_A/Mexico/4482/200 DATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTIAMELI 194
gi|237511913_A/Mexico/4603/200 DATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTIAMELI 194
gi|237511895_A/Mexico/4604/200 DATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTIAMELI 194
gi|229783369_A/Korea/01/2009 DATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTIAMELI 194
gi|229535818_A/California/14/2 DATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTIAMELI 194
gi|229535905_A/Massachusetts/0 DATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTIAMELI 194
gi|229536096_A/Massachusetts/0 DATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTIAMELI 194
gi|229536109_A/Michigan/02/200 DATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTIAMELI 194
gi|229536123_A/New_York/13/200 DATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTIAMELI 194
gi|229535786_A/New_York/22/200 DATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTIAMELI 194
gi|229396367_A/New_York/06/200 DATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTIAMELI 194
gi|229396437_A/New_York/10/200 DATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTIAMELI 194
gi|229396377_A/New_York/11/200 DATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTIAMELI 194
gi|229396453_A/New_York/15/200 DATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTIAMELI 194
gi|229396393_A/New_York/18/200 DATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTIAMELI 194
gi|229396417_A/New_York/23/200 DATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTIAMELI 194
gi|229396406_A/New_York/31/200 DATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTIAMELI 194
gi|229598873_A/Ohio/07/2009 DATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTIAMELI 194
gi|229396492_A/Ohio/07/2009 DATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTIAMELI 194
gi|237511901_A/Mexico/4516/200 DATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTIAMELI 194
gi|229892750_A/Canada-AB/RV153 DATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTIAMELI 200
gi|229892746_A/Canada-ON/RV152 DATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTIAMELI 200
gi|229892748_A/Canada-ON/RV152 DATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTIAMELI 200
gi|229484052_A/Canada-ON/RV152 DATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTIAMELI 200
gi|229892744_A/Mexico/InDRE411 DATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTIAMELI 200
gi|229484050_A/Mexico/InDRE448 DATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTIAMELI 200
gi|229396423_A/California/08/2 DATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTIAMELI 194
gi|229535987_A/South_Carolina/ DATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTIAMELI 194
gi|229536131_A/Colorado/03/200 DATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTIAMELI 194
gi|229892752_A/Canada-NS/RV153 DATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTIAMELI 200
gi|229536102_A/Nebraska/02/200 DATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTIAMELI 194
gi|229892742_A/Canada-NS/RV153 DATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTIAMELI 200
gi|229484048_A/Canada-NS/RV153 DATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTIAMELI 200
gi|237624329_A/swine/Alberta/O DATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTIAMKLI 200
***********************************************:**
gi|229536005_A/Kansas/03/2009 RMIKRGINDRNFWRGENGRRTRVAYERMCNILKGKFQTAAQRAMMDQVRE 244
gi|229783384_A/New_York/1669/2 RMIKRGINDRNFWRGENGRRTRVAYERMCNILKGKFQTAAQRAMMDQVRE 244
gi|229536077_A/Indiana/09/2009 RMIKRGINDRNFWRGENGRRTRVAYERMCNILKGKFQTAAQRAMMDQVRE 244
gi|227831778_A/California/06/2 RMIKRGINDRNFWRGENGRRTRVAYERMCNILKGKFQTAAQRAMMDQVRE 244
gi|227831761_A/California/05/2 RMIKRGINDRNFWRGENGRRTRVAYERMCNILKGKFQTAAQRAMMDQVRE 244
gi|229462701_A/Valencia/GP4/20 RMIKRGINDRNFWRGENGRRTRVAYERMCNILKGKFQTAAQRAMMDQVRE 244
gi|229462713_A/Pais_Vasco/GP20 RMIKRGINDRNFWRGENGRRTRVAYERMCNILKGKFQTAAQRAMMDQVRE 244
gi|229462689_A/Castilla-La_Man RMIKRGINDRNFWRGENGRRTRVAYERMCNILKGKFQTAAQRAMMDQVRE 244
gi|229536066_A/Texas/07/2009 RMIKRGINDRNFWRGENGRRTRVAYERMCNILKGKFQTAAQRAMMDQVRE 244
gi|229536024_A/Minnesota/02/20 RMIKRGINDRNFWRGENGRRTRVAYERMCNILKGKFQTAAQRAMMDQVRE 244
gi|229536038_A/Arizona/02/2009 RMIKRGINDRNFWRGENGRRTRVAYERMCNILKGKFQTAAQRAMMDQVRE 244
gi|229783405_A/New_York/1682/2 RMIKRGINDRNFWRGENGRRTRVAYERMCNILKGKFQTAAQRAMMDQVRE 244
gi|237511891_A/Mexico/4486/200 RMIKRGINDRNFWRGENGRRTRVAYERMCNILKGKFQTAAQRAMMDQVRE 244
gi|237511915_A/Mexico/4108/200 RMIKRGINDRNFWRGENGRRTRVAYERMCNILKGKFQTAAQRAMMDQVRE 244
gi|227977162_A/California/07/2 RMIKRGINDRNFWRGENGRRTRVAYERMCNILKGKFQTAAQRAMMDQVRE 244
gi|229536012_A/Arizona/01/2009 RMIKRGINDRNFWRGENGRRTRVAYERMCNILKGKFQTAAQRAMMDQVRE 244
gi|229598884_A/Texas/15/2009 RMIKRGINDRNFWRGENGRRTRVAYERMCNILKGKFQTAAQRAMMDQVRE 244
gi|229299508_A/Texas/05/2009 RMIKRGINDRNFWRGENGRRTRVAYERMCNILKGKFQTAAQRAMMDQVRE 244
gi|227831792_A/Texas/05/2009 RMIKRGINDRNFWRGENGRRTRVAYERMCNILKGKFQTAAQRAMMDQVRE 244
gi|229299528_A/Texas/04/2009 RMIKRGINDRNFWRGENGRRTRVAYERMCNILKGKFQTAAQRAMMDQVRE 244
gi|227831819_A/Texas/04/2009 RMIKRGINDRNFWRGENGRRTRVAYERMCNILKGKFQTAAQRAMMDQVRE 244
gi|227977106_A/California/04/2 RMIKRGINDRNFWRGENGRRTRVAYERMCNILKGKFQTAAQRAMMDQVRE 244
gi|227809832_A/California/04/2 RMIKRGINDRNFWRGENGRRTRVAYERMCNILKGKFQTAAQRAMMDQVRE 244
gi|229396465_A/Texas/06/2009 RMIKRGINDRNFWRGENGRRTRVAYERMCNILKGKFQTAAQRAMMDQVRE 244
gi|229462725_A/Castilla-La_Man RMIKRGINDRNFWRGENGRRTRVAYERMCNILKGKFQTAAQRAMMDQVRE 244
gi|229535799_A/Texas/09/2009 RMIKRGINDRNFWRGENGRRTRVAYERMCNILKGKFQTAAQRAMMDQVRE 244
gi|229535951_A/Texas/08/2009 RMIKRGINDRNFWRGENGRRTRVAYERMCNILKGKFQTAAQRAMMDQVRE 244
gi|229535999_A/Kansas/02/2009 RMIKRGINDRNFWRGENGRRTRVAYERMCNILKGKFQTAAQRAMMDQVRE 244
gi|237511917_A/Mexico/4115/200 RMIKRGINDRNFWRGENGRRTRVAYERMCNILKGKFQTAAQRAMMDQVRE 244
gi|229536057_A/New_York/20/200 RMIKRGINDRNFWRGENGRRTRVAYERMCNILKGKFQTAAQRAMMDQVRE 244
gi|229396355_A/New_York/12/200 RMIKRGINDRNFWRGENGRRTRVAYERMCNILKGKFQTAAQRAMMDQVRE 244
gi|229536051_A/New_York/20/200 RMIKRGINDRNFWRGENGRRTRVAYERMCNILKGKFQTAAQRAMMDQVRE 244
gi|229396481_A/New_York/19/200 RMIKRGINDRNFWRGENGRRTRVAYERMCNILKGKFQTAAQRAMMDQVRE 244
gi|237511911_A/Mexico/4482/200 RMIKRGINDRNFWRGENGRRTRVAYERMCNILKGKFQTAAQRAMMDQVRE 244
gi|237511913_A/Mexico/4603/200 RMIKRGINDRNFWRGENGRRTRVAYERMCNILKGKFQTAAQRAMMDQVRE 244
gi|237511895_A/Mexico/4604/200 RMIKRGINDRNFWRGENGRRTRVAYERMCNILKGKFQTAAQRAMMDQVRE 244
gi|229783369_A/Korea/01/2009 RMIKRGINDRNFWRGENGRRTRVAYERMCNILKGKFQTAAQRAMMDQVRE 244
gi|229535818_A/California/14/2 RMIKRGINDRNFWRGENGRRTRVAYERMCNILKGKFQTAAQRAMMDQVRE 244
gi|229535905_A/Massachusetts/0 RMIKRGINDRNFWRGENGRRTRVAYERMCNILKGKFQTAAQRAMMDQVRE 244
gi|229536096_A/Massachusetts/0 RMIKRGINDRNFWRGENGRRTRVAYERMCNILKGKFQTAAQRAMMDQVRE 244
gi|229536109_A/Michigan/02/200 RMIKRGINDRNFWRGENGRRTRVAYERMCNILKGKFQTAAQRAMMDQVRE 244
gi|229536123_A/New_York/13/200 RMIKRGINDRNFWRGENGRRTRVAYERMCNILKGKFQTAAQRAMMDQVRE 244
gi|229535786_A/New_York/22/200 RMIKRGINDRNFWRGENGRRTRVAYERMCNILKGKFQTAAQRAMMDQVRE 244
gi|229396367_A/New_York/06/200 RMIKRGINDRNFWRGENGRRTRVAYERMCNILKGKFQTAAQRAMMDQVRE 244
gi|229396437_A/New_York/10/200 RMIKRGINDRNFWRGENGRRTRVAYERMCNILKGKFQTAAQRAMMDQVRE 244
gi|229396377_A/New_York/11/200 RMIKRGINDRNFWRGENGRRTRVAYERMCNILKGKFQTAAQRAMMDQVRE 244
gi|229396453_A/New_York/15/200 RMIKRGINDRNFWRGENGRRTRVAYERMCNILKGKFQTAAQRAMMDQVRE 244
gi|229396393_A/New_York/18/200 RMIKRGINDRNFWRGENGRRTRVAYERMCNILKGKFQTAAQRAMMDQVRE 244
gi|229396417_A/New_York/23/200 RMIKRGINDRNFWRGENGRRTRVAYERMCNILKGKFQTAAQRAMMDQVRE 244
gi|229396406_A/New_York/31/200 RMIKRGINDRNFWRGENGRRTRVAYERMCNILKGKFQTAAQRAMMDQVRE 244
gi|229598873_A/Ohio/07/2009 RMIKRGINDRNFWRGENGRRTRVAYERMCNILKGKFQTAAQRAMMDQVRE 244
gi|229396492_A/Ohio/07/2009 RMIKRGINDRNFWRGENGRRTRVAYERMCNILKGKFQTAAQRAMMDQVRE 244
gi|237511901_A/Mexico/4516/200 RMIKRGINDRNFWRGENGRRTRVAYERMCNILKGKFQTAAQRAMMDQVRE 244
gi|229892750_A/Canada-AB/RV153 RMIKRGINDRNFWRGENGRRTRVAYERMCNILKGKFQTAAQRAMMDQVRE 250
gi|229892746_A/Canada-ON/RV152 RMIKRGINDRNFWRGENGRRTRVAYERMCNILKGKFQTAAQRAMMDQVRE 250
gi|229892748_A/Canada-ON/RV152 RMIKRGINDRNFWRGENGRRTRVAYERMCNILKGKFQTAAQRAMMDQVRE 250
gi|229484052_A/Canada-ON/RV152 RMIKRGINDRNFWRGENGRRTRVAYERMCNILKGKFQTAAQRAMMDQVRE 250
gi|229892744_A/Mexico/InDRE411 RMIKRGINDRNFWRGENGRRTRVAYERMCNILKGKFQTAAQRAMMDQVRE 250
gi|229484050_A/Mexico/InDRE448 RMIKRGINDRNFWRGENGRRTRVAYERMCNILKGKFQTAAQRAMMDQVRE 250
gi|229396423_A/California/08/2 RMIKRGINDRNFWRGENGRRTRVAYERMCNILKGKFQTAAQRAMMDQVRE 244
gi|229535987_A/South_Carolina/ RMIKRGINDRNFWRGENGRRTRVAYERMCNILKGKFQTAAQRAMMDQVRE 244
gi|229536131_A/Colorado/03/200 RMIKRGINDRNFWRGENGRRTRIAYERMCNILKGKFQTAAQRAMMDQVRE 244
gi|229892752_A/Canada-NS/RV153 RMIKRGINDRNFWRGENGRRTRVAYERMCNILKGKFQTAAQRAMMDQVRE 250
gi|229536102_A/Nebraska/02/200 RMIKRGINDRNFWRGENGRRTRIAYERMCNILKGKFQTAAQRAMMDQVRE 244
gi|229892742_A/Canada-NS/RV153 RMIKRGINDRNFWRGENGRRTRVAYERMCNILKGKFQTAAQRAMMDQVRE 250
gi|229484048_A/Canada-NS/RV153 RMIKRGINDRNFWRGENGRRTRVAYERMCNILKGKFQTAAQRAMMDQVRE 250
gi|237624329_A/swine/Alberta/O RMIKRGIDDRNFWRGENGRRTRVAYERTCNILKGKFQTAAQRAMMDQVRE 250
*******:**************:**** **********************
gi|229536005_A/Kansas/03/2009 SRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYGLAVASGHDFERE 294
gi|229783384_A/New_York/1669/2 SRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYGLAVASGHDFERE 294
gi|229536077_A/Indiana/09/2009 SRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYGLAVASGHDFERE 294
gi|227831778_A/California/06/2 SRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYGLAVASGHDFERE 294
gi|227831761_A/California/05/2 SRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYGLAVASGHDFERE 294
gi|229462701_A/Valencia/GP4/20 SRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYGLAVASGHDFERE 294
gi|229462713_A/Pais_Vasco/GP20 SRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYGLAVASGHDFERE 294
gi|229462689_A/Castilla-La_Man SRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYGLAVASGHDFERE 294
gi|229536066_A/Texas/07/2009 SRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYGLAVASGHDFERE 294
gi|229536024_A/Minnesota/02/20 SRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYGLAVASGHDFERE 294
gi|229536038_A/Arizona/02/2009 SRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYGLAVASGHDFERE 294
gi|229783405_A/New_York/1682/2 SRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYGLAVASGHDFERE 294
gi|237511891_A/Mexico/4486/200 SRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYGLAVASGHDFERE 294
gi|237511915_A/Mexico/4108/200 SRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYGLAVASGHDFERE 294
gi|227977162_A/California/07/2 SRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYGLAVASGHDFERE 294
gi|229536012_A/Arizona/01/2009 SRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYGLAVASGHDFERE 294
gi|229598884_A/Texas/15/2009 SRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYGLAVASGHDFERE 294
gi|229299508_A/Texas/05/2009 SRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYGLAVASGHDFERE 294
gi|227831792_A/Texas/05/2009 SRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYGLAVASGHDFERE 294
gi|229299528_A/Texas/04/2009 SRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYGLAVASGHDFERE 294
gi|227831819_A/Texas/04/2009 SRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYGLAVASGHDFERE 294
gi|227977106_A/California/04/2 SRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYGLAVASGHDFERE 294
gi|227809832_A/California/04/2 SRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYGLAVASGHDFERE 294
gi|229396465_A/Texas/06/2009 SRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYGLAVASGHDFERE 294
gi|229462725_A/Castilla-La_Man SRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYGLAVASGHDFERE 294
gi|229535799_A/Texas/09/2009 SRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYGLAVASGHDFERE 294
gi|229535951_A/Texas/08/2009 SRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYGLAVASGHDFERE 294
gi|229535999_A/Kansas/02/2009 SRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYGLAVASGHDFERE 294
gi|237511917_A/Mexico/4115/200 SRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYGLAVASGHDFERE 294
gi|229536057_A/New_York/20/200 SRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYGLAVASGHDFERE 294
gi|229396355_A/New_York/12/200 SRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYGLAVASGHDFERE 294
gi|229536051_A/New_York/20/200 SRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYGLAVASGHDFERE 294
gi|229396481_A/New_York/19/200 SRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYGLAVASGHDFERE 294
gi|237511911_A/Mexico/4482/200 SRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYGLAVASGHDFERE 294
gi|237511913_A/Mexico/4603/200 SRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYGLAVASGHDFERE 294
gi|237511895_A/Mexico/4604/200 SRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYGLAVASGHDFERE 294
gi|229783369_A/Korea/01/2009 SRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYGLAVASGHDFERE 294
gi|229535818_A/California/14/2 SRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYGLAVASGHDFERE 294
gi|229535905_A/Massachusetts/0 SRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYGLAVASGHDFERE 294
gi|229536096_A/Massachusetts/0 SRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYGLAVASGHDFERE 294
gi|229536109_A/Michigan/02/200 SRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYGLAVASGHDFERE 294
gi|229536123_A/New_York/13/200 SRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYGLAVASGHDFERE 294
gi|229535786_A/New_York/22/200 SRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYGLAVASGHDFERE 294
gi|229396367_A/New_York/06/200 SRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYGLAVASGHDFERE 294
gi|229396437_A/New_York/10/200 SRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYGLAVASGHDFERE 294
gi|229396377_A/New_York/11/200 SRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYGLAVASGHDFERE 294
gi|229396453_A/New_York/15/200 SRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYGLAVASGHDFERE 294
gi|229396393_A/New_York/18/200 SRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYGLAVASGHDFERE 294
gi|229396417_A/New_York/23/200 SRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYGLAVASGHDFERE 294
gi|229396406_A/New_York/31/200 SRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYGLAVASGHDFERE 294
gi|229598873_A/Ohio/07/2009 SRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYGLAVASGHDFERE 294
gi|229396492_A/Ohio/07/2009 SRNPGNTEIEDLIFLARSALILRGSVAHKSCLPACVYGLAVASGHDFERE 294
gi|237511901_A/Mexico/4516/200 SRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYGLAVASGHDFERE 294
gi|229892750_A/Canada-AB/RV153 SRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYGLAVASGHDFERE 300
gi|229892746_A/Canada-ON/RV152 SRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYGLAVASGHDFERE 300
gi|229892748_A/Canada-ON/RV152 SRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYGLAVASGHDFERE 300
gi|229484052_A/Canada-ON/RV152 SRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYGLAVASGHDFERE 300
gi|229892744_A/Mexico/InDRE411 SRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYGLAVASGHDFERE 300
gi|229484050_A/Mexico/InDRE448 SRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYGLAVASGHDFERE 300
gi|229396423_A/California/08/2 SRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYGLAVASGHDFERE 294
gi|229535987_A/South_Carolina/ SRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYGLAVASGHDFERE 294
gi|229536131_A/Colorado/03/200 SRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYGLAVASGHDFERE 294
gi|229892752_A/Canada-NS/RV153 SRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYGLAVASGHDFERE 300
gi|229536102_A/Nebraska/02/200 SRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYGLAVASGHDFERE 294
gi|229892742_A/Canada-NS/RV153 SRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYGLAVASGHDFERE 300
gi|229484048_A/Canada-NS/RV153 SRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYGLAVASGHDFERE 300
gi|237624329_A/swine/Alberta/O SRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYGLAVASGHDFERE 300
******:*******************************************
gi|229536005_A/Kansas/03/2009 GYSLVGIDPFKLLQNSQVVSLMRPNENPAHKSQLVWMACHSAAFEDLRVS 344
gi|229783384_A/New_York/1669/2 GYSLVGIDPFKLLQNSQVVSLMRPNENPAHKSQLVWMACHSAAFEDLRVS 344
gi|229536077_A/Indiana/09/2009 GYSLVGIDPFKLLQNSQVVSLMRPNENPAHKSQLVWMACHSAAFEDLRVS 344
gi|227831778_A/California/06/2 GYSLVGIDPFKLLQNSQVVSLMRPNENPAHKSQLVWMACHSAAFEDLRVS 344
gi|227831761_A/California/05/2 GYSLVGIDPFKLLQNSQVVSLMRPNENPAHKSQLVWMACHSAAFEDLRVS 344
gi|229462701_A/Valencia/GP4/20 GYSLVGIDPFKLLQNSQVVSLMRPNENPAHKSQLVWMACHSAAFEDLRVS 344
gi|229462713_A/Pais_Vasco/GP20 GYSLVGIDPFKLLQNSQVVSLMRPNENPAHKSQLVWMACHSAAFEDLRVS 344
gi|229462689_A/Castilla-La_Man GYSLVGIDPFKLLQNSQVVSLMRPNENPAHKSQLVWMACHSAAFEDLRVS 344
gi|229536066_A/Texas/07/2009 GYSLVGIDPFKLLQNSQVVSLMRPNENPAHKSQLVWMACHSAAFEDLRVS 344
gi|229536024_A/Minnesota/02/20 GYSLVGIDPFKLLQNSQVVSLMRPNENPAHKSQLVWMACHSAAFEDLRVS 344
gi|229536038_A/Arizona/02/2009 GYSLVGIDPFKLLQNSQVVSLMRPNENPAHKSQLVWMACHSAAFEDLRVS 344
gi|229783405_A/New_York/1682/2 GYSLVGIDPFKLLQNSQVVSLMRPNENPAHKSQLVWMACHSAAFEDLRVS 344
gi|237511891_A/Mexico/4486/200 GYSLVGIDPFKLLQNSQVVSLMRPNENPAHKSQLVWMACHSAAFEDLRVS 344
gi|237511915_A/Mexico/4108/200 GYSLVGIDPFKLLQNSQVVSLMRPNENPAHKSQLVWMACHSAAFEDLRVS 344
gi|227977162_A/California/07/2 GYSLVGIDPFKLLQNSQVVSLMRPNENPAHKSQLVWMACHSAAFEDLRVS 344
gi|229536012_A/Arizona/01/2009 GYSLVGIDPFKLLQNSQVVSLMRPNENPAHKSQLVWMACHSAAFEDLRVS 344
gi|229598884_A/Texas/15/2009 GYSLVGIDPFKLLQNSQVVSLMRPNENPAHKSQLVWMACHSAAFEDLRVS 344
gi|229299508_A/Texas/05/2009 GYSLVGIDPFKLLQNSQVVSLMRPNENPAHKSQLVWMACHSAAFEDLRVS 344
gi|227831792_A/Texas/05/2009 GYSLVGIDPFKLLQNSQVVSLMRPNENPAHKSQLVWMACHSAAFEDLRVS 344
gi|229299528_A/Texas/04/2009 GYSLVGIDPFKLLQNSQVVSLMRPNENPAHKSQLVWMACHSAAFEDLRVS 344
gi|227831819_A/Texas/04/2009 GYSLVGIDPFKLLQNSQVVSLMRPNENPAHKSQLVWMACHSAAFEDLRVS 344
gi|227977106_A/California/04/2 GYSLVGIDPFKLLQNSQVVSLMRPNENPAHKSQLVWMACHSAAFEDLRVS 344
gi|227809832_A/California/04/2 GYSLVGIDPFKLLQNSQVVSLMRPNENPAHKSQLVWMACHSAAFEDLRVS 344
gi|229396465_A/Texas/06/2009 GYSLVGIDPFKLLQNSQVVSLMRPNENPAHKSQLVWMACHSAAFEDLRVS 344
gi|229462725_A/Castilla-La_Man GYSLVGIDPFKLLQNSQVVSLMRPNENPAHKSQLVWMACHSAAFEDLRVS 344
gi|229535799_A/Texas/09/2009 GYSLVGIDPFKLLQNSQVVSLMRPNENPAHKSQLVWMACHSAAFEDLRVS 344
gi|229535951_A/Texas/08/2009 GYSLVGIDPFKLLQNSQVVSLMRPNENPAHKSQLVWMACHSAAFEDLRVS 344
gi|229535999_A/Kansas/02/2009 GYSLVGIDPFKLLQNSQVVSLMRPNENPAHKSQLVWMACHSAAFEDLRVS 344
gi|237511917_A/Mexico/4115/200 GYSLVGIDPFKLLQNSQVVSLMRPNENPAHKSQLVWMACHSAAFEDLRVS 344
gi|229536057_A/New_York/20/200 GYSLVGIDPFKLLQNSQVVSLMRPNENPAHKSQLVWMACHSAAFEDLRVS 344
gi|229396355_A/New_York/12/200 GYSLVGIDPFKLLQNSQVVSLMRPNENPAHKSQLVWMACHSAAFEDLRVS 344
gi|229536051_A/New_York/20/200 GYSLVGIDPFKLLQNSQVVSLMRPNENPAHKSQLVWMACHSAAFEDLRVS 344
gi|229396481_A/New_York/19/200 GYSLVGIDPFKLLQNSQVVSLMRPNENPAHKSQLVWMACHSAAFEDLRVS 344
gi|237511911_A/Mexico/4482/200 GYSLVGIDPFKLLQNSQVVSLMRPNENPAHKSQLVWMACHSAAFEDLRVS 344
gi|237511913_A/Mexico/4603/200 GYSLVGIDPFKLLQNSQVVSLMRPNENPAHKSQLVWMACHSAAFEDLRVS 344
gi|237511895_A/Mexico/4604/200 GYSLVGIDPFKLLQNSQVVSLMRPNENPAHKSQLVWMACHSAAFEDLRVS 344
gi|229783369_A/Korea/01/2009 GYSLVGIDPFKLLQNSQVVSLMRPNENPAHKSQLVWMACHSAAFEDLRVS 344
gi|229535818_A/California/14/2 GYSLVGIDPFKLLQNSQVVSLMRPNENPAHKSQLVWMACHSAAFEDLRVS 344
gi|229535905_A/Massachusetts/0 GYSLVGIDPFKLLQNSQVVSLMRPNENPAHKSQLVWMACHSAAFEDLRVS 344
gi|229536096_A/Massachusetts/0 GYSLVGIDPFKLLQNSQVVSLMRPNENPAHKSQLVWMACHSAAFEDLRVS 344
gi|229536109_A/Michigan/02/200 GYSLVGIDPFKLLQNSQVVSLMRPNENPAHKSQLVWMACHSAAFEDLRVS 344
gi|229536123_A/New_York/13/200 GYSLVGIDPFKLLQNSQVVSLMRPNENPAHKSQLVWMACHSAAFEDLRVS 344
gi|229535786_A/New_York/22/200 GYSLVGIDPFKLLQNSQVVSLMRPNENPAHKSQLVWMACHSAAFEDLRVS 344
gi|229396367_A/New_York/06/200 GYSLVGIDPFKLLQNSQVVSLMRPNENPAHKSQLVWMACHSAAFEDLRVS 344
gi|229396437_A/New_York/10/200 GYSLVGIDPFKLLQNSQVVSLMRPNENPAHKSQLVWMACHSAAFEDLRVS 344
gi|229396377_A/New_York/11/200 GYSLVGIDPFKLLQNSQVVSLMRPNENPAHKSQLVWMACHSAAFEDLRVS 344
gi|229396453_A/New_York/15/200 GYSLVGIDPFKLLQNSQVVSLMRPNENPAHKSQLVWMACHSAAFEDLRVS 344
gi|229396393_A/New_York/18/200 GYSLVGIDPFKLLQNSQVVSLMRPNENPAHKSQLVWMACHSAAFEDLRVS 344
gi|229396417_A/New_York/23/200 GYSLVGIDPFKLLQNSQVVSLMRPNENPAHKSQLVWMACHSAAFEDLRVS 344
gi|229396406_A/New_York/31/200 GYSLVGIDPFKLLQNSQVVSLMRPNENPAHKSQLVWMACHSAAFEDLRVS 344
gi|229598873_A/Ohio/07/2009 GYSLVGIDPFKLLQNSQVVSLMRPNENPAHKSQLVWMACHSAAFEDLRVS 344
gi|229396492_A/Ohio/07/2009 GYSLVGIDPFKLLQNSQVVSLMRPNENPAHKSQLVWMACHSAAFEDLRVS 344
gi|237511901_A/Mexico/4516/200 GYSLVGIDPFKLLQNSQVVSLMRPNENPAHKSQLVWMACHSAAFEDLRVS 344
gi|229892750_A/Canada-AB/RV153 GYSLVGIDPFKLLQNSQVVSLMRPNENPAHKSQLVWMACHSAAFEDLRVS 350
gi|229892746_A/Canada-ON/RV152 GYSLVGIDPFKLLQNSQVVSLMRPNENPAHKSQLVWMACHSAAFEDLRVS 350
gi|229892748_A/Canada-ON/RV152 GYSLVGIDPFKLLQNSQVVSLMRPNENPAHKSQLVWMACHSAAFEDLRVS 350
gi|229484052_A/Canada-ON/RV152 GYSLVGIDPFKLLQNSQVVSLMRPNENPAHKSQLVWMACHSAAFEDLRVS 350
gi|229892744_A/Mexico/InDRE411 GYSLVGIDPFKLLQNSQVVSLMRPNENPAHKSQLVWMACHSAAFEDLRVS 350
gi|229484050_A/Mexico/InDRE448 GYSLVGIDPFKLLQNSQVVSLMRPNENPAHKSQLVWMACHSAAFEDLRVS 350
gi|229396423_A/California/08/2 GYSLVGIDPFKLLQNSQVVSLMRPNENPAHKSQLVWMACHSAAFEDLRVS 344
gi|229535987_A/South_Carolina/ GYSLVGIDPFKLLQNSQVVSLMRPNENPAHKSQLVWMACHSAAFEDLRIS 344
gi|229536131_A/Colorado/03/200 GYSLVGIDPFKLLQNSQVVSLMRPNENPAHKSQLVWMACHSAAFEDLRIS 344
gi|229892752_A/Canada-NS/RV153 GYSLVGIDPFKLLQNSQVVSLMRPNENPAHKSQLVWMACHSAAFEDLRVS 350
gi|229536102_A/Nebraska/02/200 GYSLVGIDPFKLLQNSQVVSLMRPNENPAHKSQLVWMACHSAAFEDLRVS 344
gi|229892742_A/Canada-NS/RV153 GYSLVGIDPFKLLQNSQVVSLMRPNENPAHKSQLVWMACHSAAFEDLRVS 350
gi|229484048_A/Canada-NS/RV153 GYSLVGIDPFKLLQNSQVVSLMRPNENPAHKSQLVWMACHSAAFEDLRVS 350
gi|237624329_A/swine/Alberta/O GYSLVGIDPFKLLQNSQVVSLMRPNENPAHKSQLVWMACHSAAFEDLRVS 350
************************************************:*
gi|229536005_A/Kansas/03/2009 SFIRGKKVIPRGKLSTRGVQIASNENVEIMDSNTLELRSRYWAIRTRSGG 394
gi|229783384_A/New_York/1669/2 SFIRGKKVIPRGKLSTRGVQIASNENVEIMDSNTLELRSRYWAIRTRSGG 394
gi|229536077_A/Indiana/09/2009 SFIRGKKVIPRGKLSTRGIQIASNENVEIMDSNTLELRSRYWAIRTRSGG 394
gi|227831778_A/California/06/2 SFIRGKKVIPRGKLSTRGVQIASNENVEIMDSNTLELRSRYWAIRTRSGG 394
gi|227831761_A/California/05/2 SFIRGKKVIPRGKLSTRGVQIASNENVEIMDSNTLELRSRYWAIRTRSGG 394
gi|229462701_A/Valencia/GP4/20 SFIRGKKVIPRGKLSTRGVQIASNENVEIMDSNTLELRSRYWAIRTRSGG 394
gi|229462713_A/Pais_Vasco/GP20 SFIRGKKVIPRGKLSTRGVQIASNENVEIMDSNTLELRSRYWAIRTRSGG 394
gi|229462689_A/Castilla-La_Man SFIRGKKVIPRGKLSTRGVQIASNENVEIMDSNTLELRSRYWAIRTRSGG 394
gi|229536066_A/Texas/07/2009 SFIRGKKVIPRGKLSTRGVQIASNENVEIMDSNTLELRSRYWAIRTRSGG 394
gi|229536024_A/Minnesota/02/20 SFIRGKKVIPRGKLSTRGVQIASNENVEIMDSNTLELRSRYWAIRTRSGG 394
gi|229536038_A/Arizona/02/2009 SFIRGKKVIPRGKLSTRGVQIASNENVEIMDSNTLELRSRYWAIRTRSGG 394
gi|229783405_A/New_York/1682/2 SFIRGKKVIPRGKLSTRGVQIASNENVEIMDSNTLELRSRYWAIRTRSGG 394
gi|237511891_A/Mexico/4486/200 SFIRGKKVIPRGKLSTRGVQIASNENVEIMDSNTLELRSRYWAIRTRSGG 394
gi|237511915_A/Mexico/4108/200 SFIRGKKVIPRGKLSTRGVQIASNENVEIMDSNTLELRSRYWAIRTRSGG 394
gi|227977162_A/California/07/2 SFIRGKKVIPRGKLSTRGVQIASNENVETMDSNTLELRSRYWAIRTRSGG 394
gi|229536012_A/Arizona/01/2009 SFIRGKKVIPRGKLSTRGVQIASNENVETMDSNTLELRSRYWAIRTRSGG 394
gi|229598884_A/Texas/15/2009 SFIRGKKVIPRGKLSTRGVQIASNENVETMDSNTLELRSRYWAIRTRSGG 394
gi|229299508_A/Texas/05/2009 SFIRGKKVIPRGKLSTRGVQIASNENVETMDSNTLELRSRYWAIRTRSGG 394
gi|227831792_A/Texas/05/2009 SFIRGKKVIPRGKLSTRGVQIASNENVETMDSNTLELRSRYWAIRTRSGG 394
gi|229299528_A/Texas/04/2009 SFIRGKKVIPRGKLSTRGVQIASNENVETMDSNTLELRSRYWAIRTRSGG 394
gi|227831819_A/Texas/04/2009 SFIRGKKVIPRGKLSTRGVQIASNENVETMDSNTLELRSRYWAIRTRSGG 394
gi|227977106_A/California/04/2 SFIRGKKVIPRGKLSTRGVQIASNENVETMDSNTLELRSRYWAIRTRSGG 394
gi|227809832_A/California/04/2 SFIRGKKVIPRGKLSTRGVQIASNENVETMDSNTLELRSRYWAIRTRSGG 394
gi|229396465_A/Texas/06/2009 SFIRGKKVIPRGKLSTRGVQIASNENVETMDSNTLELRSRYWAIRTRSGG 394
gi|229462725_A/Castilla-La_Man SFIRGKKVIPRGKLSTRGVQIASNENVETMDSNTLELRSRYWAIRTRSGG 394
gi|229535799_A/Texas/09/2009 SFIRGKKVIPRGKLSTRGVQIASNENVETMDSNTLELRSRYWAIRTRSGG 394
gi|229535951_A/Texas/08/2009 SFIRGKKVIPRGKLSTRGVQIASNENVETMDSNTLELRSRYWAIRTRSGG 394
gi|229535999_A/Kansas/02/2009 SFIRGKKVIPRGKLSTRGVQIASNENVETMDSNTLELRSRYWAIRTRSGG 394
gi|237511917_A/Mexico/4115/200 SFIRGKKVIPRGKLSTRGVQIASNENVETMDSNTLELRSRYWAIRTRSGG 394
gi|229536057_A/New_York/20/200 SFIRGKKVIPRGKLSTRGVQIASNENVETMDSNTLELRSRYWAIRTRSGG 394
gi|229396355_A/New_York/12/200 SFIRGKKVIPRGKLSTRGVQIASNENVETMDSNTLELRSRYWAIRTRSGG 394
gi|229536051_A/New_York/20/200 SFIRGKKVIPRGKLSTRGVQIASNENVETMDSNTLELRSRYWAIRTRSGG 394
gi|229396481_A/New_York/19/200 SFIRGKKVIPRGKLSTRGVQIASNENVETMDSNTLELRSRYWAIRTRSGG 394
gi|237511911_A/Mexico/4482/200 SFIRGKKVIPRGKLSTRGVQIASNENVETMDSNTLELRSRYWAIRTRSGG 394
gi|237511913_A/Mexico/4603/200 SFIRGKKVIPRGKLSTRGVQIASNENVETMDSNTLELRSRYWAIRTRSGG 394
gi|237511895_A/Mexico/4604/200 SFIRGKKVIPRGKLSTRGVQIASNENVETMDSNTLELRSRYWAIRTRSGG 394
gi|229783369_A/Korea/01/2009 SFIRGKKVIPRGKLSTRGVQIASNENVETMDSNTLELRSRYWAIRTRSGG 394
gi|229535818_A/California/14/2 SFIRGKKVIPRGKLSTRGVQIASNENVETMDSNTLELRSRYWAIRTRSGG 394
gi|229535905_A/Massachusetts/0 SFIRGKKVIPRGKLSTRGVQIASNENVETMDSNTLELRSRYWAIRTRSGG 394
gi|229536096_A/Massachusetts/0 SFIRGKKVIPRGKLSTRGVQIASNENVETMDSNTLELRSRYWAIRTRSGG 394
gi|229536109_A/Michigan/02/200 SFIRGKKVIPRGKLSTRGVQIASNENVETMDSNTLELRSRYWAIRTRSGG 394
gi|229536123_A/New_York/13/200 SFIRGKKVIPRGKLSTRGVQIASNENVETMDSNTLELRSRYWAIRTRSGG 394
gi|229535786_A/New_York/22/200 SFIRGKKVIPRGKLSTRGVQIASNENVETMDSNTLELRSRYWAIRTRSGG 394
gi|229396367_A/New_York/06/200 SFIRGKKVIPRGKLSTRGVQIASNENVETMDSNTLELRSRYWAIRTRSGG 394
gi|229396437_A/New_York/10/200 SFIRGKKVIPRGKLSTRGVQIASNENVETMDSNTLELRSRYWAIRTRSGG 394
gi|229396377_A/New_York/11/200 SFIRGKKVIPRGKLSTRGVQIASNENVETMDSNTLELRSRYWAIRTRSGG 394
gi|229396453_A/New_York/15/200 SFIRGKKVIPRGKLSTRGVQIASNENVETMDSNTLELRSRYWAIRTRSGG 394
gi|229396393_A/New_York/18/200 SFIRGKKVIPRGKLSTRGVQIASNENVETMDSNTLELRSRYWAIRTRSGG 394
gi|229396417_A/New_York/23/200 SFIRGKKVIPRGKLSTRGVQIASNENVETMDSNTLELRSRYWAIRTRSGG 394
gi|229396406_A/New_York/31/200 SFIRGKKVIPRGKLSTRGVQIASNENVETMDSNTLELRSRYWAIRTRSGG 394
gi|229598873_A/Ohio/07/2009 SFIRGKKMIPRGKLSTRGVQIASNENVETMDSNTLELRSRYWAIRTRSGG 394
gi|229396492_A/Ohio/07/2009 SFIRGKKVIPRGKLSTRGVQIASNENVETMDSNTLELRSRYWAIRTRSGG 394
gi|237511901_A/Mexico/4516/200 SFIRGKKVIPRGKLSTRGVQIASNENVETMDSNTLELRSRYWAIRTRSGG 394
gi|229892750_A/Canada-AB/RV153 SFIRGKKVIPRGKLSTRGVQIASNENVETMDSNTLELRSRYWAIRTRSGG 400
gi|229892746_A/Canada-ON/RV152 SFIRGKKVIPRGKLSTRGVQIASNENVETMDSNTLELRSRYWAIRTRSGG 400
gi|229892748_A/Canada-ON/RV152 SFIRGKKVIPRGKLSTRGVQIASNENVETMDSNTLELRSRYWAIRTRSGG 400
gi|229484052_A/Canada-ON/RV152 SFIRGKKVIPRGKLSTRGVQIASNENVETMDSNTLELRSRYWAIRTRSGG 400
gi|229892744_A/Mexico/InDRE411 SFIRGKKVIPRGKLSTRGVQIASNENVETMDSNTLELRSRYWAIRTRSGG 400
gi|229484050_A/Mexico/InDRE448 SFIRGKKVIPRGKLSTRGVQIASNENVETMDSNTLELRSRYWAIRTRSGG 400
gi|229396423_A/California/08/2 SFIRGKKVIPRGKLSTRGVQIASNENVETMNSNTLELRSRYWAIRTRSGG 394
gi|229535987_A/South_Carolina/ SFIRGKKVIPRGKLSTRGVQIASNENVETMDSNTLELRSRYWAIRTRSGG 394
gi|229536131_A/Colorado/03/200 SFIRGKKVIPRGKLSTRGVQIASNENVETMDSNTLELRSRYWAIRTRSGG 394
gi|229892752_A/Canada-NS/RV153 SFIRGKKVIPRGKLSTRGVQIASNENVEVMDSNTLELRSRYWAIRTRSGG 400
gi|229536102_A/Nebraska/02/200 SFIRGKKVIPRGKLSTRGVQIASNENVEIMDSNTLELRSRYWAIRTRSGG 394
gi|229892742_A/Canada-NS/RV153 SFIRGKKVIPRGKLSTRGVQIASNENVEIMDSNTLELRSRYWAIRTRSGG 400
gi|229484048_A/Canada-NS/RV153 SFIRGKKVIPRGKLSTRGVQIASNENVEIMDSNTLELRSRYWAIRTRSGG 400
gi|237624329_A/swine/Alberta/O SFIRGKKVIPRGKLSTRGVQIASNENVEIMYSNTLELRSRYWAIRTRSGG 400
*******:**********:********* * *******************
gi|229536005_A/Kansas/03/2009 NTNQQKASAGQISVQPTFSVQRNLPFERATVMAAFSGNNEGRTSDMRTEV 444
gi|229783384_A/New_York/1669/2 NTNQQKASAGQISVQPTFSVQRNLPFERATVMAAFSGNNEGRTSDMRTEV 444
gi|229536077_A/Indiana/09/2009 NTNQQKASAGQISVQPTFSVQRNLPFERATVMAAFSGNNEGRTSDMRTEV 444
gi|227831778_A/California/06/2 NTNQQKASAGQISVQPTFSVQRNLPFERATVMAAFSGNNEGRTSDMRTEV 444
gi|227831761_A/California/05/2 NTNQQKASAGQISVQPTFSVQRNLPFERATVMAAFSGNNEGRTSDMRTEV 444
gi|229462701_A/Valencia/GP4/20 NTNQQKASAGQISVQPTFSVQRNLPFERATVMAAFSGNNEGRTSDMRTEV 444
gi|229462713_A/Pais_Vasco/GP20 NTNQQKASAGQISVQPTFSVQRNLPFERATVMAAFSGNNEGRTSDMRTEV 444
gi|229462689_A/Castilla-La_Man NTNQQKASAGQISVQPTFSVQRNLPFERATVMAAFSGNNEGRTSDMRTEV 444
gi|229536066_A/Texas/07/2009 NTNQQKASAGQISVQPTFSVQRNLPFERATVMAAFSGNNEGRTSDMRTEV 444
gi|229536024_A/Minnesota/02/20 NTNQQKASAGQISVQPTFSVQRNLPFERATVMAAFSGNNEGRTSDMRTEV 444
gi|229536038_A/Arizona/02/2009 NTNQQKASAGQISVQPTFSVQRNLPFERATVMAAFSGNNEGRTSDMRTEV 444
gi|229783405_A/New_York/1682/2 NTNQQKASAGQISVQPTFSVQRNLPFERATVMAAFSGNNEGRTSDMRTEV 444
gi|237511891_A/Mexico/4486/200 NTNQQKASAGQISVQPTFSVQRNLPFERATVMAAFSGNNEGRTSDMRTEV 444
gi|237511915_A/Mexico/4108/200 NTNQQKASAGQISVQPTFSVQRNLPFERATVMAAFSGNNEGRTSDMRTEV 444
gi|227977162_A/California/07/2 NTNQQKASAGQISVQPTFSVQRNLPFERATVMAAFSGNNEGRTSDMRTEV 444
gi|229536012_A/Arizona/01/2009 NTNQQKASAGQISVQPTFSVQRNLPFERATVMAAFSGNNEGRTSDMRTEV 444
gi|229598884_A/Texas/15/2009 NTNQQKASAGQISVQPTFSVQRNLPFERATVMAAFSGNNEGRTSDMRTEV 444
gi|229299508_A/Texas/05/2009 NTNQQKASAGQISVQPTFSVQRNLPFERATVMAAFSGNNEGRTSDMRTEV 444
gi|227831792_A/Texas/05/2009 NTNQQKASAGQISVQPTFSVQRNLPFERATVMAAFSGNNEGRTSDMRTEV 444
gi|229299528_A/Texas/04/2009 NTNQQKASAGQISVQPTFSVQRNLPFERATVMAAFSGNNEGRTSDMRTEV 444
gi|227831819_A/Texas/04/2009 NTNQQKASAGQISVQPTFSVQRNLPFERATVMAAFSGNNEGRTSDMRTEV 444
gi|227977106_A/California/04/2 NTNQQKASAGQISVQPTFSVQRNLPFERATVMAAFSGNNEGRTSDMRTEV 444
gi|227809832_A/California/04/2 NTNQQKASAGQISVQPTFSVQRNLPFERATVMAAFSGNNEGRTSDMRTEV 444
gi|229396465_A/Texas/06/2009 NTNQQKASAGQISVQPTFSVQRNLPFERATVMAAFSGNNEGRTSDMRTEV 444
gi|229462725_A/Castilla-La_Man NTNQQKASAGQISVQPTFSVQRNLPFERATVMAAFSGNNEGRTSDMRTEV 444
gi|229535799_A/Texas/09/2009 NTNQQKASAGQISVQPTFSVQRNLPFERATVMAAFSGNNEGRTSDMRTEV 444
gi|229535951_A/Texas/08/2009 NTNQQKASAGQISVQPTFSVQRNLPFERATVMAAFSGNNEGRTSDMRTEV 444
gi|229535999_A/Kansas/02/2009 NTNQQKASAGQISVQPTFSVQRNLPFERATVMAAFSGNNEGRTSDMRTEV 444
gi|237511917_A/Mexico/4115/200 NTNQQKASAGQISVQPTFSVQRNLPFERATVMAAFSGNNEGRTSDMRTEV 444
gi|229536057_A/New_York/20/200 NTNQQKASAGQISVQPTFSVQRNLPFERATVMAAFSGNNEGRTSDMRTEV 444
gi|229396355_A/New_York/12/200 NTNQQKASAGQISVQPTFSVQRNLPFERATVMAAFSGNNEGRTSDMRTEV 444
gi|229536051_A/New_York/20/200 NTNQQKASAGQISVQPTFSVQRNLPFERATVMAAFSGNNEGRTSDMRTEV 444
gi|229396481_A/New_York/19/200 NTNQQKASAGQISVQPTFSVQRNLPFERATVMAAFSGNNEGRTSDMRTEV 444
gi|237511911_A/Mexico/4482/200 NTNQQKASAGQISVQPTFSVQRNLPFERATVMAAFSGNNEGRTSDMRTEV 444
gi|237511913_A/Mexico/4603/200 NTNQQKASAGQISVQPTFSVQRNLPFERATVMAAFSGNNEGRTSDMRTEV 444
gi|237511895_A/Mexico/4604/200 NTNQQKASAGQISVQPTFSVQRNLPFERATVMAAFSGNNEGRTSDMRTEV 444
gi|229783369_A/Korea/01/2009 NTNQQKASAGQISVQPTFSVQRNLPFERATVMAAFSGNNEGRTSDMRTEV 444
gi|229535818_A/California/14/2 NTNQQKASAGQISVQPTFSVQRNLPFERATVMAAFSGNNEGRTSDMRTEV 444
gi|229535905_A/Massachusetts/0 NTNQQKASAGQISVQPTFSVQRNLPFERATVMAAFSGNNEGRTSDMRTEV 444
gi|229536096_A/Massachusetts/0 NTNQQKASAGQISVQPTFSVQRNLPFERATVMAAFSGNNEGRTSDMRTEV 444
gi|229536109_A/Michigan/02/200 NTNQQKASAGQISVQPTFSVQRNLPFERATVMAAFSGNNEGRTSDMRTEV 444
gi|229536123_A/New_York/13/200 NTNQQKASAGQISVQPTFSVQRNLPFERATVMAAFSGNNEGRTSDMRTEV 444
gi|229535786_A/New_York/22/200 NTNQQKASAGQISVQPTFSVQRNLPFERATVMAAFSGNNEGRTSDMRTEV 444
gi|229396367_A/New_York/06/200 NTNQQKASAGQISVQPTFSVQRNLPFERATVMAAFSGNNEGRTSDMRTEV 444
gi|229396437_A/New_York/10/200 NTNQQKASAGQISVQPTFSVQRNLPFERATVMAAFSGNNEGRTSDMRTEV 444
gi|229396377_A/New_York/11/200 NTNQQKASAGQISVQPTFSVQRNLPFERATVMAAFSGNNEGRTSDMRTEV 444
gi|229396453_A/New_York/15/200 NTNQQKASAGQISVQPTFSVQRNLPFERATVMAAFSGNNEGRTSDMRTEV 444
gi|229396393_A/New_York/18/200 NTNQQKASAGQISVQPTFSVQRNLPFERATVMAAFSGNNEGRTSDMRTEV 444
gi|229396417_A/New_York/23/200 NTNQQKASAGQISVQPTFSVQRNLPFERATVMAAFSGNNEGRTSDMRTEV 444
gi|229396406_A/New_York/31/200 NTNQQKASAGQISVQPTFSVQRNLPFERATVMAAFSGNNEGRTSDMRTEV 444
gi|229598873_A/Ohio/07/2009 NTNQQKASAGQISVQPTFSVQRNLPFERATVMAAFSGNNEGRTSDMRTEV 444
gi|229396492_A/Ohio/07/2009 NTNQQKASAGQISVQPTFSVQRNLPFERATVMAAFSGNNEGRTSDMRTEV 444
gi|237511901_A/Mexico/4516/200 NANQQKASAGQISVQPTFSVQRNLPFERATVMAAFSGNNEGRTSDMRTEV 444
gi|229892750_A/Canada-AB/RV153 NTNQQKASAGQISVQPTFSVQRNLPFERATVMAAFSGNNEGRTSDMRTEV 450
gi|229892746_A/Canada-ON/RV152 NTNQQKASAGQISVQPTFSVQRNLPFERATVMAAFSGNNEGRTSDMRTEV 450
gi|229892748_A/Canada-ON/RV152 NTNQQKASAGQISVQPTFSVQRNLPFERATVMAAFSGNNEGRTSDMRTEV 450
gi|229484052_A/Canada-ON/RV152 NTNQQKASAGQISVQPTFSVQRNLPFERATVMAAFSGNNEGRTSDMRTEV 450
gi|229892744_A/Mexico/InDRE411 NTNQQKASAGQISVQPTFSVQRNLPFERATVMAAFSGNNEGRTSDMRTEV 450
gi|229484050_A/Mexico/InDRE448 NTNQQKASAGQISVQPTFSVQRNLPFERATVMAAFSGNNEGRTSDMRTEV 450
gi|229396423_A/California/08/2 NTNQQKASAGQISVQPTFSVQRNLPFERATVMAAFSGNNEGRTSDMRTEV 444
gi|229535987_A/South_Carolina/ NTNQQKASAGQISVQPTFSVQRNLPFERATVMAAFSGNNEGRTSDMRTEV 444
gi|229536131_A/Colorado/03/200 NTNQQKASAGQISVQPTFSVQRNLPFERATVMAAFSGNNEGRTSDMRTEV 444
gi|229892752_A/Canada-NS/RV153 NTNQQKASAGQISVQPTFSVQRNLPFERATVMAAFSGNNEGRTSDMRTEV 450
gi|229536102_A/Nebraska/02/200 NTNQQKASAGQISVQPTFSVQRNLPFERATVMAAFSGNNEGRTSDMRTEV 444
gi|229892742_A/Canada-NS/RV153 NTNQQKASAGQISVQPTFSVQRNLPFERATVMAAFSGNNEGRTSDMRTEV 450
gi|229484048_A/Canada-NS/RV153 NTNQQKASAGQISVQPTFSVQRNLPFERATVMAAFSGNNEGRTSDMRTEV 450
gi|237624329_A/swine/Alberta/O NTNQQKASAGQISVQPTFSVQRNLPFERATVMAAFSGNNEGRTSDMRTEV 450
*:************************************************
gi|229536005_A/Kansas/03/2009 IRMMESAKPEDLSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAE 494
gi|229783384_A/New_York/1669/2 IRMMESAKPEDLSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAE 494
gi|229536077_A/Indiana/09/2009 IRMMENAKPEDLSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAE 494
gi|227831778_A/California/06/2 IRMMESAKPEDLSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAE 494
gi|227831761_A/California/05/2 IRMMESAKPEDLSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAE 494
gi|229462701_A/Valencia/GP4/20 IRMMESAKPEDLSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAE 494
gi|229462713_A/Pais_Vasco/GP20 IRMMESAKPEDLSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAE 494
gi|229462689_A/Castilla-La_Man IRMMESAKPEDLSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAE 494
gi|229536066_A/Texas/07/2009 IRMMESAKPEDLSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAE 494
gi|229536024_A/Minnesota/02/20 IRMMESAKPEDLSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAE 494
gi|229536038_A/Arizona/02/2009 IRMMESAKPEDLSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAE 494
gi|229783405_A/New_York/1682/2 IRMMESAKPEDLSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAE 494
gi|237511891_A/Mexico/4486/200 IRMMESAKPEDLSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAE 494
gi|237511915_A/Mexico/4108/200 IRMMESAKPEDLSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAE 494
gi|227977162_A/California/07/2 IRMMESAKPEDLSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAE 494
gi|229536012_A/Arizona/01/2009 IRMMESAKPEDLSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAE 494
gi|229598884_A/Texas/15/2009 IRMMESAKPEDLSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAE 494
gi|229299508_A/Texas/05/2009 IRMMESAKPEDLSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAE 494
gi|227831792_A/Texas/05/2009 IRMMESAKPEDLSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAE 494
gi|229299528_A/Texas/04/2009 IRMMESAKPEDLSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAE 494
gi|227831819_A/Texas/04/2009 IRMMESAKPEDLSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAE 494
gi|227977106_A/California/04/2 IRMMESAKPEDLSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAE 494
gi|227809832_A/California/04/2 IRMMESAKPEDLSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAE 494
gi|229396465_A/Texas/06/2009 IRMMESAKPEDLSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAE 494
gi|229462725_A/Castilla-La_Man IRMMESAKPEDLSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAE 494
gi|229535799_A/Texas/09/2009 IRMMESAKPEDLSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAE 494
gi|229535951_A/Texas/08/2009 IRMMESAKPEDLSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAE 494
gi|229535999_A/Kansas/02/2009 IRMMESAKPEDLSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAE 494
gi|237511917_A/Mexico/4115/200 IRMMESAKPEDLSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAE 494
gi|229536057_A/New_York/20/200 IRMMESAKPEDLSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAE 494
gi|229396355_A/New_York/12/200 IRMMESAKPEDLSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAE 494
gi|229536051_A/New_York/20/200 IRMMESAKPEDLSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAE 494
gi|229396481_A/New_York/19/200 IRMMESAKPEDLSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAE 494
gi|237511911_A/Mexico/4482/200 IRMMESAKPEDLSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAE 494
gi|237511913_A/Mexico/4603/200 IRMMESAKPEDLSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAE 494
gi|237511895_A/Mexico/4604/200 IRMMESAKPEDLSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAE 494
gi|229783369_A/Korea/01/2009 IRMMESAKPEDLSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAE 494
gi|229535818_A/California/14/2 IRMMESAKPEDLSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAE 494
gi|229535905_A/Massachusetts/0 IRMMESAKPEDLSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAE 494
gi|229536096_A/Massachusetts/0 IRMMESAKPEDLSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAE 494
gi|229536109_A/Michigan/02/200 IRMMESAKPEDLSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAE 494
gi|229536123_A/New_York/13/200 IRMMESAKPEDLSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAE 494
gi|229535786_A/New_York/22/200 IRMMESAKPEDLSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAE 494
gi|229396367_A/New_York/06/200 IRMMESAKPEDLSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAE 494
gi|229396437_A/New_York/10/200 IRMMESAKPEDLSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAE 494
gi|229396377_A/New_York/11/200 IRMMESAKPEDLSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAE 494
gi|229396453_A/New_York/15/200 IRMMESAKPEDLSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAE 494
gi|229396393_A/New_York/18/200 IRMMESAKPEDLSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAE 494
gi|229396417_A/New_York/23/200 IRMMESAKPEDLSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAE 494
gi|229396406_A/New_York/31/200 IRMMESAKPEDLSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAE 494
gi|229598873_A/Ohio/07/2009 IRMMESAKPEDLSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAE 494
gi|229396492_A/Ohio/07/2009 IRMMESAKPEDLSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAE 494
gi|237511901_A/Mexico/4516/200 IRMMESAKPEDLSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAE 494
gi|229892750_A/Canada-AB/RV153 IRMMESAKPEDLSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAE 500
gi|229892746_A/Canada-ON/RV152 IRMMESAKPEDLSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAE 500
gi|229892748_A/Canada-ON/RV152 IRMMESAKPEDLSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAE 500
gi|229484052_A/Canada-ON/RV152 IRMMESAKPEDLSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAE 500
gi|229892744_A/Mexico/InDRE411 IRMMESAKPEDLSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAE 500
gi|229484050_A/Mexico/InDRE448 IRMMESAKPEDLSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAE 500
gi|229396423_A/California/08/2 IRMMESAKPEDLSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAE 494
gi|229535987_A/South_Carolina/ IRMMESAKPEDLSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAE 494
gi|229536131_A/Colorado/03/200 IRMMESAKPEDLSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAE 494
gi|229892752_A/Canada-NS/RV153 IRMMESAKPEDLSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAE 500
gi|229536102_A/Nebraska/02/200 IRMMESAKPEDLSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAE 494
gi|229892742_A/Canada-NS/RV153 IRMMESAKPEDLSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAE 500
gi|229484048_A/Canada-NS/RV153 IRMMESAKPEDLSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAE 500
gi|237624329_A/swine/Alberta/O IRMMESAKPEDLSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAE 500
*****.********************************************
gi|229536005_A/Kansas/03/2009 EYDS 498
gi|229783384_A/New_York/1669/2 EYDS 498
gi|229536077_A/Indiana/09/2009 EYDS 498
gi|227831778_A/California/06/2 EYDS 498
gi|227831761_A/California/05/2 EYDS 498
gi|229462701_A/Valencia/GP4/20 EYDS 498
gi|229462713_A/Pais_Vasco/GP20 EYDS 498
gi|229462689_A/Castilla-La_Man EYDS 498
gi|229536066_A/Texas/07/2009 EYDS 498
gi|229536024_A/Minnesota/02/20 EYDS 498
gi|229536038_A/Arizona/02/2009 EYDS 498
gi|229783405_A/New_York/1682/2 EYDS 498
gi|237511891_A/Mexico/4486/200 EYDS 498
gi|237511915_A/Mexico/4108/200 EYDS 498
gi|227977162_A/California/07/2 EYDS 498
gi|229536012_A/Arizona/01/2009 EYDS 498
gi|229598884_A/Texas/15/2009 EYDS 498
gi|229299508_A/Texas/05/2009 EYDS 498
gi|227831792_A/Texas/05/2009 EYDS 498
gi|229299528_A/Texas/04/2009 EYDS 498
gi|227831819_A/Texas/04/2009 EYDS 498
gi|227977106_A/California/04/2 EYDS 498
gi|227809832_A/California/04/2 EYDS 498
gi|229396465_A/Texas/06/2009 EYDS 498
gi|229462725_A/Castilla-La_Man EYDS 498
gi|229535799_A/Texas/09/2009 EYDS 498
gi|229535951_A/Texas/08/2009 EYDS 498
gi|229535999_A/Kansas/02/2009 EYDS 498
gi|237511917_A/Mexico/4115/200 EYDS 498
gi|229536057_A/New_York/20/200 EYDS 498
gi|229396355_A/New_York/12/200 EY-- 496
gi|229536051_A/New_York/20/200 EYDS 498
gi|229396481_A/New_York/19/200 EYDS 498
gi|237511911_A/Mexico/4482/200 EYDS 498
gi|237511913_A/Mexico/4603/200 EYDS 498
gi|237511895_A/Mexico/4604/200 EYDS 498
gi|229783369_A/Korea/01/2009 EYDS 498
gi|229535818_A/California/14/2 EYDS 498
gi|229535905_A/Massachusetts/0 EYDS 498
gi|229536096_A/Massachusetts/0 EYDS 498
gi|229536109_A/Michigan/02/200 EYDS 498
gi|229536123_A/New_York/13/200 EYDS 498
gi|229535786_A/New_York/22/200 EYDS 498
gi|229396367_A/New_York/06/200 EYDS 498
gi|229396437_A/New_York/10/200 EYDS 498
gi|229396377_A/New_York/11/200 EYDS 498
gi|229396453_A/New_York/15/200 EYDS 498
gi|229396393_A/New_York/18/200 EYDS 498
gi|229396417_A/New_York/23/200 EYDS 498
gi|229396406_A/New_York/31/200 EYDS 498
gi|229598873_A/Ohio/07/2009 EYDS 498
gi|229396492_A/Ohio/07/2009 EYDS 498
gi|237511901_A/Mexico/4516/200 EYDS 498
gi|229892750_A/Canada-AB/RV153 EYDS 504
gi|229892746_A/Canada-ON/RV152 EYDS 504
gi|229892748_A/Canada-ON/RV152 EYDS 504
gi|229484052_A/Canada-ON/RV152 EYDS 504
gi|229892744_A/Mexico/InDRE411 EYDS 504
gi|229484050_A/Mexico/InDRE448 EYDS 504
gi|229396423_A/California/08/2 EYDS 498
gi|229535987_A/South_Carolina/ EYDS 498
gi|229536131_A/Colorado/03/200 EYDS 498
gi|229892752_A/Canada-NS/RV153 EYDS 504
gi|229536102_A/Nebraska/02/200 EYDS 498
gi|229892742_A/Canada-NS/RV153 EYDS 504
gi|229484048_A/Canada-NS/RV153 EYDS 504
gi|237624329_A/swine/Alberta/O EYDS 504
**