1qdm

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Revision as of 01:28, 21 November 2007 by OCA (talk | contribs) (New page: left|200px<br /><applet load="1qdm" size="450" color="white" frame="true" align="right" spinBox="true" caption="1qdm, resolution 2.3Å" /> '''CRYSTAL STRUCTURE OF ...)
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File:1qdm.gif


1qdm, resolution 2.3Å

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CRYSTAL STRUCTURE OF PROPHYTEPSIN, A ZYMOGEN OF A BARLEY VACUOLAR ASPARTIC PROTEINASE.

OverviewOverview

We determined at 2.3 A resolution the crystal structure of prophytepsin, a, zymogen of a barley vacuolar aspartic proteinase. In addition to the, classical pepsin-like bilobal main body of phytepsin, we also traced most, of the propeptide, as well as an independent plant-specific domain, never, before described in structural terms. The structure revealed that, in, addition to the propeptide, 13 N-terminal residues of the mature phytepsin, are essential for inactivation of the enzyme. Comparison of the, plant-specific domain with NK-lysin indicates that these two saposin-like, structures are closely related, suggesting that all saposins and, saposin-like domains share a common topology. Structural analysis of, prophytepsin led to the identification of a putative membrane, receptor-binding site involved in Golgi-mediated transport to vacuoles.

About this StructureAbout this Structure

1QDM is a Single protein structure of sequence from Hordeum vulgare. Active as Phytepsin, with EC number 3.4.23.40 Full crystallographic information is available from OCA.

ReferenceReference

Crystal structure of plant aspartic proteinase prophytepsin: inactivation and vacuolar targeting., Kervinen J, Tobin GJ, Costa J, Waugh DS, Wlodawer A, Zdanov A, EMBO J. 1999 Jul 15;18(14):3947-55. PMID:10406799

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