1j8q
Low Temperature (100K) Crystal Structure of Flavodoxin D. vulgaris Wild-type at 1.35 Angstrom Resolution
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OverviewOverview
Engineered flavodoxins in which a surface residue has been replaced by an, exposed cysteine are useful modules to link multi-domain redox proteins, obtained by gene fusion to electrode surfaces. In the present work, the, crystal structure of the S35C mutant of Desulfovibrio vulgaris flavodoxin, in the oxidized state has been determined and compared with a refined, structure of the wild type (wt). The structure of wt flavodoxin (space, group P4(3)2(1)2, unit-cell parameters a = 50.52, b = 50.52, c = 138.59 A), at 1.34 A resolution has been refined to R = 0.16 and R(free) = 0.18. The, structure of the S35C mutant (space group P4(3)2(1)2, unit-cell parameters, a = 50.55, b = 50.55, c = 138.39 A) at 1.44 A resolution has been refined, to R = 0.13 and R(free) = 0.16. Data sets were collected with synchrotron, radiation at 100 K. In the S35C mutant, the Cys35 thiol group points, towards a hydrophobic region, whilst in the wt the Ser35 hydroxyl group, points towards a more polar region. The solvent exposure of Cys35 is 43, A(2), of which 8 A(2) is for the sulfur. This is comparable to the, exposure of 48 A(2) found for the wt Ser35, where that of the hydroxyl, oxygen is also 8 A(2).
About this StructureAbout this Structure
1J8Q is a Single protein structure of sequence from Desulfovibrio vulgaris with FMN as ligand. Full crystallographic information is available from OCA.
ReferenceReference
Comparison of the refined crystal structures of wild-type (1.34 A) flavodoxin from Desulfovibrio vulgaris and the S35C mutant (1.44 A) at 100 K., Artali R, Bombieri G, Meneghetti F, Gilardi G, Sadeghi SJ, Cavazzini D, Rossi GL, Acta Crystallogr D Biol Crystallogr. 2002 Oct;58(Pt 10 Pt 2):1787-92. Epub, 2002 Sep 28. PMID:12351822
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