8p1k

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Structure of hantaan orthohantavirus (HTNV) polymerase - Apo core endonucleaseStructure of hantaan orthohantavirus (HTNV) polymerase - Apo core endonuclease

Structural highlights

8p1k is a 1 chain structure with sequence from Orthohantavirus hantanense. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:Electron Microscopy, Resolution 3.24Å
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

L_HANTV

Publication Abstract from PubMed

Hantaviridae are a family of segmented negative-sense RNA viruses that contain important human and animal pathogens. Hantaviridae contain a viral RNA-dependent RNA polymerase that replicates and transcribes the viral genome. Here we establish the expression and purification of the polymerase from the Old World Hantaan virus and characterise the structure using Cryo-EM. We determine a series of structures at resolutions between 2.7 and 3.3 A of RNA free polymerase comprising the core, core and endonuclease, and a full-length polymerase. The full-length polymerase structure depicts the location of the cap binding and C-terminal domains which are arranged in a conformation that is incompatible with transcription and in a novel conformation not observed in previous conformations of cap-snatching viral polymerases. We further describe structures with 5' vRNA promoter in the presence and absence of a nucleotide triphosphate. The nucleotide bound structure mimics a replication pre-initiation complex and the nucleotide stabilises the motif E in a conformation distinct from those previously observed. We observe motif E in four distinct conformations including beta-sheet, two helical arrangements, and nucleotide primed arrangement. The insights gained here guide future mechanistic studies of both the transcription and replication activities of the hantavirus polymerase and for the development of therapeutic targets.

Structural characterization of the full-length Hantaan virus polymerase.,Keown JR, Carrique L, Nilsson-Payant BE, Fodor E, Grimes JM PLoS Pathog. 2024 Dec 9;20(12):e1012781. doi: 10.1371/journal.ppat.1012781. , eCollection 2024 Dec. PMID:39652621[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

  1. Keown JR, Carrique L, Nilsson-Payant BE, Fodor E, Grimes JM. Structural characterization of the full-length Hantaan virus polymerase. PLoS Pathog. 2024 Dec 9;20(12):e1012781. PMID:39652621 doi:10.1371/journal.ppat.1012781

8p1k, resolution 3.24Å

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