6kv2

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Crystal structure of trypsin inhibitor 1 from Senna obtusifoliaCrystal structure of trypsin inhibitor 1 from Senna obtusifolia

Structural highlights

6kv2 is a 4 chain structure with sequence from Senna obtusifolia. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.003Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

A0A097P6E1_9FABA

Publication Abstract from PubMed

Although digestive resistance of Kunitz protease inhibitors has been reported extensively, the molecular mechanism is not well established. In the present study, the first X-ray structure of Cassia obtusifolia trypsin inhibitor (COTI), a member of Kunitz protease inhibitors, was solved at a resolution of 1.9 A. The structure adopted a classic beta-trefoil fold with the inhibitory loop protruding from the hydrophobic core. The role of Phe139, a unique residue in Kunitz protease inhibitors, and Arg63 in the COTI structure was verified by F139A and R63E mutants. COTI was a specific inhibitor of bovine trypsin and the result was also verified by COTI-trypsin complex formation. Meanwhile, COTI showed equivalent inhibitory activity with that of soybean trypsin inhibitor against bovine trypsin and midgut trypsin from Pieris rapae. The F139 and R63E mutants further indicated that inhibitory specificity and efficiency of COTI were closely related to the global framework, the conformation and the amino acid composition of reactive loop. Finally, a midgut trypsin from P. rapae (PrSP40), which might be involve in the food digestion, was proposed to be a potential target of COTI and might be a promising target for future crop-protection strategy. The results supported the digestive resistance of COTI.

Structural and functional relationship of Cassia obtusifolia trypsin inhibitor to understand its digestive resistance against Pieris rapae.,Zhou J, Li C, Chen A, Zhu J, Zou M, Liao H, Yu Y Int J Biol Macromol. 2020 Jan 22;148:908-920. doi:, 10.1016/j.ijbiomac.2020.01.193. PMID:31981663[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

See Also

References

  1. Zhou J, Li C, Chen A, Zhu J, Zou M, Liao H, Yu Y. Structural and functional relationship of Cassia obtusifolia trypsin inhibitor to understand its digestive resistance against Pieris rapae. Int J Biol Macromol. 2020 Jan 22;148:908-920. doi:, 10.1016/j.ijbiomac.2020.01.193. PMID:31981663 doi:http://dx.doi.org/10.1016/j.ijbiomac.2020.01.193

6kv2, resolution 2.00Å

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