7qno

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Crystal structure of ligand-free Danio rerio HDAC6 CD1 CD2Crystal structure of ligand-free Danio rerio HDAC6 CD1 CD2

Structural highlights

7qno is a 1 chain structure with sequence from Danio rerio. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.38Å
Ligands:, , ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

F8W4B7_DANRE

Publication Abstract from PubMed

Histone deacetylase 6 (HDAC6) is an atypical lysine deacetylase with tandem catalytic domains and an ubiquitin-binding zinc finger domain. HDAC6 is involved in various biological processes, such as cell motility or stress responses, and has been implicated in pathologies ranging from cancer to neurodegeneration. Due to this broad range of functions, there has been considerable interest in developing HDAC6-specific small molecule inhibitors, several of which are already available. The crystal structure of the tandem catalytic domains of zebrafish HDAC6 has revealed an arrangement with twofold symmetry and extensive surface interaction between the catalytic domains. Further dissection of the biochemical properties of HDAC6 and the development of novel inhibitors will benefit from being able to routinely express high-quality protein. We present here our optimized protocol for expression and crystallization of the zebrafish tandem catalytic domains.

Expression and Crystallization of HDAC6 Tandem Catalytic Domains.,Langousis G, Sanchez J, Kempf G, Matthias P Methods Mol Biol. 2023;2589:467-480. doi: 10.1007/978-1-0716-2788-4_30. PMID:36255643[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

See Also

References

  1. Langousis G, Sanchez J, Kempf G, Matthias P. Expression and Crystallization of HDAC6 Tandem Catalytic Domains. Methods Mol Biol. 2023;2589:467-480. doi: 10.1007/978-1-0716-2788-4_30. PMID:36255643 doi:http://dx.doi.org/10.1007/978-1-0716-2788-4_30

7qno, resolution 2.38Å

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OCA