8or6

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Crystal structure of Drosophila melanogaster alpha-amylaseCrystal structure of Drosophila melanogaster alpha-amylase

Structural highlights

8or6 is a 2 chain structure with sequence from Drosophila melanogaster. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.5Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

AMYA_DROME

Publication Abstract from PubMed

Insects rely on carbohydrates such as starch and glycogen as an energy supply for growth of larvae and for longevity. In this sense alpha-amylases have essential roles under extreme conditions, e.g., during nutritional or temperature stress, thereby contributing to survival of the insect. This makes them interesting targets for combating insect pests. Drosophila melanogaster alpha-amylase, DMA, which belongs to the glycoside hydrolase family 13, sub family 15, has been studied from an evolutionary, biochemical, and structural point of view. Our studies revealed that the DMA enzyme is active over a broad temperature and pH range, which is in agreement with the fluctuating environmental changes with which the insect is confronted. Crystal structures disclosed a new nearly fully solvated metal ion, only coordinated to the protein via Gln263. This residue is only conserved in the subgroup of D. melanogaster and may thus contribute to the enzyme adaptive response to large temperature variations. Studies of the effect of plant inhibitors and the pseudo-tetrasaccharide inhibitor acarbose on DMA activity, allowed us to underline the important role of the so-called flexible loop on activity/inhibition, but also to suggest that the inhibition modes of the wheat inhibitors WI-1 and WI-3 on DMA, are likely different.

Structural and Functional Characterization of Drosophila melanogaster alpha-Amylase.,Rhimi M, Da Lage JL, Haser R, Feller G, Aghajari N Molecules. 2023 Jul 11;28(14):5327. doi: 10.3390/molecules28145327. PMID:37513201[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

  1. Rhimi M, Da Lage JL, Haser R, Feller G, Aghajari N. Structural and Functional Characterization of Drosophila melanogaster α-Amylase. Molecules. 2023 Jul 11;28(14):5327. PMID:37513201 doi:10.3390/molecules28145327

8or6, resolution 2.50Å

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