Structure of ABCB1/P-glycoprotein in apo stateStructure of ABCB1/P-glycoprotein in apo state

Structural highlights

7oti is a 1 chain structure. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Activity:Xenobiotic-transporting ATPase, with EC number 3.6.3.44
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

[MDR1A_MOUSE] Energy-dependent efflux pump responsible for decreased drug accumulation in multidrug-resistant cells.[1]

Publication Abstract from PubMed

ABCB1/P-glycoprotein is an ATP binding cassette transporter that is involved in the clearance of xenobiotics, and it affects the disposition of many drugs in the body. Conformational flexibility of the protein within the membrane is an intrinsic part of its mechanism of action, but this has made structural studies challenging. Here, we have studied different conformations of P-glycoprotein simultaneously in the presence of ivacaftor, a known competitive inhibitor. In order to conduct this, we used high contrast cryo-electron microscopy imaging with a Volta phase plate. We associate the presence of ivacaftor with the appearance of an additional density in one of the conformational states detected. The additional density is in the central aqueous cavity and is associated with a wider separation of the two halves of the transporter in the inward-facing state. Conformational changes to the nucleotide-binding domains are also observed and may help to explain the stimulation of ATPase activity that occurs when transported substrate is bound in many ATP binding cassette transporters.

Structure of ABCB1/P-Glycoprotein in the Presence of the CFTR Potentiator Ivacaftor.,Barbieri A, Thonghin N, Shafi T, Prince SM, Collins RF, Ford RC Membranes (Basel). 2021 Nov 25;11(12). pii: membranes11120923. doi:, 10.3390/membranes11120923. PMID:34940424[2]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

  1. Aller SG, Yu J, Ward A, Weng Y, Chittaboina S, Zhuo R, Harrell PM, Trinh YT, Zhang Q, Urbatsch IL, Chang G. Structure of P-glycoprotein reveals a molecular basis for poly-specific drug binding. Science. 2009 Mar 27;323(5922):1718-22. PMID:19325113 doi:323/5922/1718
  2. Barbieri A, Thonghin N, Shafi T, Prince SM, Collins RF, Ford RC. Structure of ABCB1/P-Glycoprotein in the Presence of the CFTR Potentiator Ivacaftor. Membranes (Basel). 2021 Nov 25;11(12). pii: membranes11120923. doi:, 10.3390/membranes11120923. PMID:34940424 doi:http://dx.doi.org/10.3390/membranes11120923

7oti, resolution 4.20Å

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