7oo4

From Proteopedia
Revision as of 23:16, 20 October 2021 by OCA (talk | contribs)
Jump to navigation Jump to search

HaloTag Engineering for Enhanced Fluorogenicity and Kinetics with a Styrylpyridine DyeHaloTag Engineering for Enhanced Fluorogenicity and Kinetics with a Styrylpyridine Dye

Structural highlights

7oo4 is a 1 chain structure with sequence from Rhoso. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:,
Gene:dhaA (RHOSO)
Activity:Haloalkane dehalogenase, with EC number 3.8.1.5
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Publication Abstract from PubMed

HaloTag is a small self-labeling protein that is frequently used for creating fluorescent reporters in living cells. The small-molecule dyes used with HaloTag are almost exclusively based on rhodamine scaffolds, which are often expensive and challenging to synthesize. Herein, we report the engineering of HaloTag for use with a chemically accessible, inexpensive fluorophore based on the dimethylamino-styrylpyridium dye. Through directed evolution, the maximum fluorogenicity and the apparent second-order bioconjugation rate constants could be improved up to 4-fold and 42-fold, respectively. One of the top variants, HT-SP5, enabled reliable imaging in mammalian cells, with a 113-fold fluorescence enhancement over the parent protein. Additionally, crystallographic characterization of selected mutants suggests the chemical origin of the fluorescent enhancement. The improved dye system offers a valuable tool for imaging and illustrates the viability of engineering self-labeling proteins for alternative fluorophores.

HaloTag Engineering for Enhanced Fluorogenicity and Kinetics with a Styrylpyridium Dye.,Miro-Vinyals C, Stein A, Fischer S, Ward TR, Deliz Liang A Chembiochem. 2021 Oct 5. doi: 10.1002/cbic.202100424. PMID:34609782[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

  1. Miro-Vinyals C, Stein A, Fischer S, Ward TR, Deliz Liang A. HaloTag Engineering for Enhanced Fluorogenicity and Kinetics with a Styrylpyridium Dye. Chembiochem. 2021 Oct 5. doi: 10.1002/cbic.202100424. PMID:34609782 doi:http://dx.doi.org/10.1002/cbic.202100424

7oo4, resolution 2.10Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA