2qen

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The walker-type atpase paby2304 of pyrococcus abyssiThe walker-type atpase paby2304 of pyrococcus abyssi

Structural highlights

2qen is a 1 chain structure with sequence from Pyrococcus abyssi. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

Publication Abstract from PubMed

Several ATPase proteins play essential roles in the initiation of chromosomal DNA replication in archaea. Walker-type ATPases are defined by their conserved Walker A and B motifs, which are associated with nucleotide binding and ATP hydrolysis. A family of 28 ATPase proteins with non-canonical Walker A sequences has been identified by a bioinformatics study of comparative genomics in Pyrococcus genomes. A high-throughput structural study on P. abyssi has been started in order to establish the structure of these proteins. 16 genes have been cloned and characterized. Six out of the seven soluble constructs were purified in Escherichia coli and one of them, PABY2304, has been crystallized. X-ray diffraction data were collected from selenomethionine-derivative crystals using synchrotron radiation. The crystals belong to the orthorhombic space group C2, with unit-cell parameters a = 79.41, b = 48.63, c = 108.77 A, and diffract to beyond 2.6 A resolution.

Cloning, purification and crystallization of a Walker-type Pyrococcus abyssi ATPase family member.,Uhring M, Bey G, Lecompte O, Cavarelli J, Moras D, Poch O Acta Crystallogr Sect F Struct Biol Cryst Commun. 2005 Oct 1;61(Pt, 10):925-7. Epub 2005 Sep 30. PMID:16511197[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

See Also

References

  1. Uhring M, Bey G, Lecompte O, Cavarelli J, Moras D, Poch O. Cloning, purification and crystallization of a Walker-type Pyrococcus abyssi ATPase family member. Acta Crystallogr Sect F Struct Biol Cryst Commun. 2005 Oct 1;61(Pt, 10):925-7. Epub 2005 Sep 30. PMID:16511197 doi:10.1107/S174430910502868X

2qen, resolution 2.25Å

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