LCP-embedded Proteinase K treated with lipaseLCP-embedded Proteinase K treated with lipase

Structural highlights

6pq4 is a 1 chain structure with sequence from Parengyodontium album. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:,
Activity:Peptidase K, with EC number 3.4.21.64
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

[PRTK_PARAQ] Hydrolyzes keratin at aromatic and hydrophobic residues.

Publication Abstract from PubMed

The lipidic cubic phase (LCP) technique has proved to facilitate the growth of high-quality crystals that are otherwise difficult to grow by other methods. However, the crystal size optimization process could be time and resource consuming, if it ever happens. Therefore, improved techniques for structure determination using these small crystals is an important strategy in diffraction technology development. Microcrystal electron diffraction (MicroED) is a technique that uses a cryo-transmission electron microscopy to collect electron diffraction data and determine high-resolution structures from very thin micro- and nanocrystals. In this work, we have used modified LCP and MicroED protocols to analyze crystals embedded in LCP converted by 2-methyl-2,4-pentanediol or lipase, including Proteinase K crystals grown in solution, cholesterol crystals, and human adenosine A2A receptor crystals grown in LCP. These results set the stage for the use of MicroED to analyze microcrystalline samples grown in LCP, especially for those highly challenging membrane protein targets.

Structure Determination from Lipidic Cubic Phase Embedded Microcrystals by MicroED.,Zhu L, Bu G, Jing L, Shi D, Lee MY, Gonen T, Liu W, Nannenga BL Structure. 2020 Jul 28. pii: S0969-2126(20)30239-2. doi:, 10.1016/j.str.2020.07.006. PMID:32735770[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

  1. Zhu L, Bu G, Jing L, Shi D, Lee MY, Gonen T, Liu W, Nannenga BL. Structure Determination from Lipidic Cubic Phase Embedded Microcrystals by MicroED. Structure. 2020 Jul 28. pii: S0969-2126(20)30239-2. doi:, 10.1016/j.str.2020.07.006. PMID:32735770 doi:http://dx.doi.org/10.1016/j.str.2020.07.006

6pq4, resolution 2.00Å

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OCA