5e9a

From Proteopedia
Revision as of 21:25, 26 October 2016 by OCA (talk | contribs)
Jump to navigation Jump to search

Crsytal structure analysis of the cold-adamped beta-galactosidase from Rahnella sp. R3Crsytal structure analysis of the cold-adamped beta-galactosidase from Rahnella sp. R3

Structural highlights

5e9a is a 6 chain structure. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:,
Activity:Beta-galactosidase, with EC number 3.2.1.23
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Publication Abstract from PubMed

A novel gene was isolated for the first time from a psychrophilic gram-negative bacterium Rahnella sp. R3. The gene encoded a cold-adapted beta-galactosidase (R-beta-Gal). Recombinant R-beta-Gal was expressed in Escherichia coli BL21 (DE3), purified and characterized. R-beta-gal belongs to the glycosyl hydrolase family 42. Circular dichroism spectrometry of the structural stability of R-beta-Gal with respect to temperature indicated that the secondary structures of the enzyme were stable to 45 degrees C. In solution, the enzyme was a homo-trimer and was active at temperatures as low as 4 degrees C. The enzyme did not require the presence of metal ions to be active, but Mg(2+), Mn(2+), and Ca(2+) enhanced its activity slightly, whereas Fe(3+), Zn(2+) and Al(3+) appeared to inactive it. The purified enzyme displayed K(m) values of 6.5 mM for ONPG and 2.2mM for lactose at 4 degrees C. These values were lower than the corresponding K(m)s reported for other cold-adapted beta-Gals.

Cloning, expression and structural stability of a cold-adapted beta-galactosidase from Rahnella sp. R3.,Fan Y, Hua X, Zhang Y, Feng Y, Shen Q, Dong J, Zhao W, Zhang W, Jin Z, Yang R Protein Expr Purif. 2015 Nov;115:158-64. doi: 10.1016/j.pep.2015.07.001. Epub, 2015 Jul 3. PMID:26145832[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

  1. Fan Y, Hua X, Zhang Y, Feng Y, Shen Q, Dong J, Zhao W, Zhang W, Jin Z, Yang R. Cloning, expression and structural stability of a cold-adapted beta-galactosidase from Rahnella sp. R3. Protein Expr Purif. 2015 Nov;115:158-64. doi: 10.1016/j.pep.2015.07.001. Epub, 2015 Jul 3. PMID:26145832 doi:http://dx.doi.org/10.1016/j.pep.2015.07.001

5e9a, resolution 2.56Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA