STRUCTURE OF THE NAD-DEPENDENT 5,10-METHYLENETETRAHYDROFOLATE DEHYDROGENASE FROM SACCHAROMYCES CEREVISIAESTRUCTURE OF THE NAD-DEPENDENT 5,10-METHYLENETETRAHYDROFOLATE DEHYDROGENASE FROM SACCHAROMYCES CEREVISIAE

Structural highlights

1edz is a 1 chain structure with sequence from Atcc 18824. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Activity:Methylenetetrahydrofolate dehydrogenase (NAD(+)), with EC number 1.5.1.15
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum

Function

[MTD1_YEAST] Catalyzes oxidation of cytoplasmic one-carbon units for purine biosynthesis.

Evolutionary Conservation

 

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Publication Abstract from PubMed

Eucaryotes possess one or more NADP-dependent methylene-THF dehydrogenases as part of multifunctional enzymes. In addition, yeast expresses an unusual monofunctional NAD-dependent enzyme, yMTD. We report X-ray structures for the apoenzyme and its complex with NAD+ at 2.8 and 3.0 A resolution, respectively. The protein fold resembles that seen for the human and Escherichia coli dehydrogenase/cyclohydrolase bifunctional enzymes. The enzyme has two prominent domains, with the active site cleft between them. yMTD has a noncanonical NAD-binding domain that has two inserted strands compared with the NADP-binding domains of the bifunctional enzymes. This insert precludes yMTD from dimerizing in the same way as the bifunctional enzymes. yMTD functions as a dimer, but the mode of dimerization is novel. It does not appear that the difference in dimerization accounts for the difference in cofactor specificity or for the loss of cyclohydrolase activity. These functional differences are probably accounted for by minor differences within the tertiary structure of the active site of the monomeric protein.

The X-ray structure of the NAD-dependent 5,10-methylenetetrahydrofolate dehydrogenase from Saccharomyces cerevisiae.,Monzingo AF, Breksa A, Ernst S, Appling DR, Robertus JD Protein Sci. 2000 Jul;9(7):1374-81. PMID:10933503[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

  1. Monzingo AF, Breksa A, Ernst S, Appling DR, Robertus JD. The X-ray structure of the NAD-dependent 5,10-methylenetetrahydrofolate dehydrogenase from Saccharomyces cerevisiae. Protein Sci. 2000 Jul;9(7):1374-81. PMID:10933503

1edz, resolution 2.80Å

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