2if0

From Proteopedia
Revision as of 19:01, 10 September 2015 by OCA (talk | contribs)
Jump to navigation Jump to search

Crystal Structure of mouse Rab27b bound to GDP in monoclinic space groupCrystal Structure of mouse Rab27b bound to GDP in monoclinic space group

Structural highlights

2if0 is a 2 chain structure with sequence from Lk3 transgenic mice. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:,
Activity:Small monomeric GTPase, with EC number 3.6.5.2
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum

Function

[RB27B_MOUSE] May be involved in targeting uroplakins to urothelial apical membranes (By similarity).

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

Publication Abstract from PubMed

Members of the Rab family of small GTPases regulate membrane traffic within the cell by recruiting their specific effectors in a nucleotide-dependent manner. The Rab27 subfamily consists of Rab27a and Rab27b, which share 70% sequence identity. By interacting with a large set of effector proteins such as melanophilin and granuphilin, both Rab27a and Rab27b regulate the exocytosis of secretory lysosomes. Here, the crystal structures of mouse Rab27b in complex with GDP have been determined in three distinct crystal lattices. Surprisingly, Rab27b-GDP exists in an open conformation with protruding switch and interswitch regions, which are stabilized through dimerization by means of domain-swapping in the crystals. In contrast, small-angle X-ray scattering measurements showed an extended monomer form of Rab27b in solution. The observed dimer formation of Rab27b-GDP in the crystals would restrain the highly flexible switch regions. Possible biological implications of this atypical structure of Rab27b and its plausible influence in effector interaction are discussed.

Structure of the small GTPase Rab27b shows an unexpected swapped dimer.,Chavas LM, Torii S, Kamikubo H, Kawasaki M, Ihara K, Kato R, Kataoka M, Izumi T, Wakatsuki S Acta Crystallogr D Biol Crystallogr. 2007 Jul;63(Pt 7):769-79. Epub 2007 Jun 15. PMID:17582168[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

  1. Chavas LM, Torii S, Kamikubo H, Kawasaki M, Ihara K, Kato R, Kataoka M, Izumi T, Wakatsuki S. Structure of the small GTPase Rab27b shows an unexpected swapped dimer. Acta Crystallogr D Biol Crystallogr. 2007 Jul;63(Pt 7):769-79. Epub 2007 Jun 15. PMID:17582168 doi:10.1107/S0907444907019725

2if0, resolution 2.80Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA