The crystal structure of BamA from Haemophilus ducreyi lacking POTRA domains 1-3The crystal structure of BamA from Haemophilus ducreyi lacking POTRA domains 1-3

Structural highlights

4k3c is a 1 chain structure with sequence from Haemophilus ducreyi. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Gene:D15, bamA (Haemophilus ducreyi)
Resources:FirstGlance, OCA, RCSB, PDBsum

Function

[Q93PM2_HAEDC] Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane (By similarity).[HAMAP-Rule:MF_01430]

Publication Abstract from PubMed

beta-barrel membrane proteins are essential for nutrient import, signalling, motility and survival. In Gram-negative bacteria, the beta-barrel assembly machinery (BAM) complex is responsible for the biogenesis of beta-barrel membrane proteins, with homologous complexes found in mitochondria and chloroplasts. Here we describe the structure of BamA, the central and essential component of the BAM complex, from two species of bacteria: Neisseria gonorrhoeae and Haemophilus ducreyi. BamA consists of a large periplasmic domain attached to a 16-strand transmembrane beta-barrel domain. Three structural features shed light on the mechanism by which BamA catalyses beta-barrel assembly. First, the interior cavity is accessible in one BamA structure and conformationally closed in the other. Second, an exterior rim of the beta-barrel has a distinctly narrowed hydrophobic surface, locally destabilizing the outer membrane. And third, the beta-barrel can undergo lateral opening, suggesting a route from the interior cavity in BamA into the outer membrane.

Structural insight into the biogenesis of beta-barrel membrane proteins.,Noinaj N, Kuszak AJ, Gumbart JC, Lukacik P, Chang H, Easley NC, Lithgow T, Buchanan SK Nature. 2013 Sep 1. doi: 10.1038/nature12521. PMID:23995689[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

  1. Noinaj N, Kuszak AJ, Gumbart JC, Lukacik P, Chang H, Easley NC, Lithgow T, Buchanan SK. Structural insight into the biogenesis of beta-barrel membrane proteins. Nature. 2013 Sep 1. doi: 10.1038/nature12521. PMID:23995689 doi:10.1038/nature12521

4k3c, resolution 2.91Å

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