4xd9

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Structure of Rpf2-Rrs1 complex involved in ribosome biogenesisStructure of Rpf2-Rrs1 complex involved in ribosome biogenesis

Structural highlights

4xd9 is a 4 chain structure with sequence from Aspergillus nidulans FGSC A4. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

C8VMF9_EMENI

Publication Abstract from PubMed

Proteins Rpf2 and Rrs1 are required for 60S ribosomal subunit maturation. These proteins are necessary for the recruitment of three ribosomal components (5S ribosomal RNA [rRNA], RpL5 and RpL11) to the 90S ribosome precursor and subsequent 27SB pre-rRNA processing. Here we present the crystal structure of the Aspergillus nidulans (An) Rpf2-Rrs1 core complex. The core complex contains the tightly interlocked N-terminal domains of Rpf2 and Rrs1. The Rpf2 N-terminal domain includes a Brix domain characterized by similar N- and C-terminal architecture. The long alpha-helix of Rrs1 joins the C-terminal half of the Brix domain as if it were part of a single molecule. The conserved proline-rich linker connecting the N- and C-terminal domains of Rrs1 wrap around the side of Rpf2 and anchor the C-terminal domain of Rrs1 to a specific site on Rpf2. In addition, gel shift analysis revealed that the Rpf2-Rrs1 complex binds directly to 5S rRNA. Further analysis of Rpf2-Rrs1 mutants demonstrated that Saccharomyces cerevisiae Rpf2 R236 (corresponds to R238 of AnRpf2) plays a significant role in this binding. Based on these studies and previous reports, we have proposed a model for ribosomal component recruitment to the 90S ribosome precursor.

Structural and functional analysis of the Rpf2-Rrs1 complex in ribosome biogenesis.,Asano N, Kato K, Nakamura A, Komoda K, Tanaka I, Yao M Nucleic Acids Res. 2015 May 19;43(9):4746-57. doi: 10.1093/nar/gkv305. Epub 2015 , Apr 8. PMID:25855814[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

  1. Asano N, Kato K, Nakamura A, Komoda K, Tanaka I, Yao M. Structural and functional analysis of the Rpf2-Rrs1 complex in ribosome biogenesis. Nucleic Acids Res. 2015 May 19;43(9):4746-57. doi: 10.1093/nar/gkv305. Epub 2015 , Apr 8. PMID:25855814 doi:http://dx.doi.org/10.1093/nar/gkv305

4xd9, resolution 2.35Å

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