Binding of two substrate analogue molecules to dihydroflavonol 4-reductase alters the functional geometry of the catalytic siteBinding of two substrate analogue molecules to dihydroflavonol 4-reductase alters the functional geometry of the catalytic site

Structural highlights

3bxx is a 6 chain structure with sequence from Grape. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:,
Gene:DFR1 (Grape)
Activity:Dihydrokaempferol 4-reductase, with EC number 1.1.1.219
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Evolutionary Conservation

 

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

Publication Abstract from PubMed

Dihydroflavonol 4-reductase (DFR) is a key enzyme of the flavonoid biosynthesis pathway which catalyses the NADPH-dependent reduction of 2R,3R-trans-dihydroflavonols to leucoanthocyanidins. The latter are the precursors of anthocyans and condensed tannins, two major classes of phenolic compounds that strongly influence the organoleptic properties of wine. DFR has been investigated in many plant species, but little was known about its structural properties until the three-dimensional structure of the Vitis vinifera enzyme complexed with NADP(+) and its natural substrate dihydroquercetin (DHQ) was described. In the course of the study of substrate specificity, crystals of DFR-NADP(+)-flavonol (myricetin and quercetin) complexes were obtained. Their structures exhibit major changes with respect to that of the abortive DFR-NADP(+)-DHQ complex. Two flavonol molecules bind to the catalytic site in a stacking arrangement and alter its geometry, which becomes incompatible with enzymatic activity. The X-ray structures of both DFR-NADP(+)-myricetin and DFR-NADP(+)-quercetin are reported together with preliminary spectroscopic data. The results suggest that flavonols could be inhibitors of the activity of DFR towards dihydroflavonols.

Structural evidence for the inhibition of grape dihydroflavonol 4-reductase by flavonols.,Trabelsi N, Petit P, Manigand C, Langlois d'Estaintot B, Granier T, Chaudiere J, Gallois B Acta Crystallogr D Biol Crystallogr. 2008 Aug;D64(Pt 8):883-91. Epub 2008, Jul 17. PMID:18645237[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

See Also

References

  1. Trabelsi N, Petit P, Manigand C, Langlois d'Estaintot B, Granier T, Chaudiere J, Gallois B. Structural evidence for the inhibition of grape dihydroflavonol 4-reductase by flavonols. Acta Crystallogr D Biol Crystallogr. 2008 Aug;D64(Pt 8):883-91. Epub 2008, Jul 17. PMID:18645237 doi:10.1107/S0907444908017769

3bxx, resolution 2.90Å

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